Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0821 ATGGCGGCAGGACTCTCCACTGCCACAATCTCAAAGCCCTACAATCTCCTCCAACCCTCACCCCCTCTCCCTAAGCCAACCCCACCACTCTTCTTCAACCCCTCAAGATGTTTCCACCACAGCACAATCCTTCGAGTTCCACCCCCAAGAAGAATGAGTGCCTTCACCGTTTGCGTCCTCACGGAGGATCCCAAACGGAACCCCCACATCAAAACggaggaggaagaaaaagaagaagaagaagaagtgagTCTTCAAGCTGTGTCAGCACGAGTGGCAGAGAAATTGGCCCGGAAGAGGTCCCAGAGGTTCACTTACCTCGTTGCGGCTGTCATGTCTAGCTTTGGCGTCACGTCTATGGCAGTCTTCGCCGTTTATTATAGATTCTCGTGGCAAATGGAGGTATCTTCACACCGGTTTGTGTTTTTTGGTCTAAGTTTGCGTATTAATGTTGGGTTGTGTTGGCATAGGGCGGAGATGTTCCTTGGTCTGAAATGTTCGGCACATTTTCCCTCTCCGTGGGTGCTGCCGTGGCTATGGAATTTTGGGCTAGATGGGCTCACAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCCCACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGACGTTTTTTGCGATAATTAACGCTGTCCCTGCCATCGCTCTTCTCTCATACGGTTTTTTCCACAAGGGTCTGGTCCCCGGCCTCTGTTTCGGTGCAGGCCTTGGAATCACGGTGTTTGGGATGGCATACATGTTTGTCCACGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCTAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTCCATCATTCGGACAAATTCAACGGGGTGCCATATGGACTGTTTTTGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGAAGAAGGTCTGGTCATGACCATGCCACTAGTATCAGAGTTGTTTGA 1020 0.4902 MAAGLSTATISKPYNLLQPSPPLPKPTPPLFFNPSRCFHHSTILRVPPPRRMSAFTVCVLTEDPKRNPHIKTEEEEKEEEEEVSLQAVSARVAEKLARKRSQRFTYLVAAVMSSFGVTSMAVFAVYYRFSWQMEVSSHRFVFFGLSLRINVGLCWHRAEMFLGLKCSAHFPSPWVLPWLWNFGLDGLTELFGMLPCGTCTSPTIDQERDHSSLTTFFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGLEELEKEISRRRRSGHDHATSIRVV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0821 339 PANTHER BETA-CAROTENE HYDROXYLASE 24 153 - -
Ssu7g0821 339 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 213 327 IPR045019 GO:0016491
Ssu7g0821 339 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 24 153 IPR045019 GO:0016491
Ssu7g0821 339 PANTHER BETA-CAROTENE HYDROXYLASE 213 327 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0821 245 325 Chloroplast and Mitochondria Gene Families AT5G52570 91.358 7.33e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0821 K15746 - gmx:547758 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0821 7 16493392 16496886 Ssu7g0821 7 16493392 16496886 ECH
Ssu7g0821 7 16493392 16496886 Ssu7g0821 7 16493392 16496886 PCT