Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0818 ATGAACACCCAAAACCTCATACCctttatccttctccttttcacACCCTTCTCTGTTTCTTTCTCTCCCGCAGATAACTTCCTTCTTAGTTGTGGATCACACAGCAATGCTTCACTTTTCAACCGAGTCTTCATGGGCGATTCCACCAACACAGGCtccacttttctctcttctgaGGATTCCATTTCACTCACATACCAAGAGCCACCTCAGAATTTGCCCCCTTTGTACCACACAGCCAGAGTTTTCAGCAGCACTGGGAGGTACAGGTTCAACATGAAGAAAAACGGCACCCACTTGGTGCGTTTTCATTTCTCCCCCTTCAAGGCTCAAAGTTTTGATCTGAAATCCGCAAAATTTAGTGTCTTTGTTAATGGGGTTTTGGTGCTGAGCAACTTCAAGCCACCTAATGATGTGCTGCTCAAAGAGTTTATTCTGAAGATAGAGTCAAACTTGCTTGAGATTTTCTTTAGGCCTGTTGGTGACTCAGGCTTTGCCTTTGTCAACGCTTTGGAGGTGTTTACTGCCCCTGTGGATTTTGTTATAGATTTTGGAGCCAGGTTGGTTGGTCCTTCTGGGGTGGAGGAATACAGAAACCTTTCATCTCAGGTTTTGGAAACTGTTCATAGGATCAATGTTGGGGGTATGAAAATAACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATCTGGTGTTTAAGGATGCAGCAAAGCCTGCAGTGAGCACTCACACCCCAAATTACCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACTCAAGTTTGGCTTCAAGGTTCAACGTAACCTGGAACTTTCCTGTGTCTCCTGGTGGTGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATCAATGCGTACATTGCATACAAGGATCTTGATTTGTCAGCCCTTACCATCCACACACTTGCATCACCTGTCTATGTGGATTTTGTTACAAATTCAGATGATTCAGGTTTTGTTCAAGTGAGTGTTGGCCCTTCTGACCTGAGCAGTTCCATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTCAATGATATCGGTACTAATATTGTGCATAGGAGGATGAATTTGTGGGTGTTGATGGGTTCAGTTGTTGGAGGAATTGTTGTCTTGTTTTTAGTTGTAACTGCTTTTCTACTTGGTACGAAATGCAGGAACAAGAAACCAAAACAAAGGACAGTGGAAAGTGTTGGATGGACACCTTTAAGTATGTTTGGAGGGAGTTCCCTTAGTAGAACCTCTGAACTTGGTTCTCATGGACTTCTTGGCATGAAGATCCCTTTTGCTGAAATACAATCAGCAACAAACAATTTTGACAGAAATCTGATTATAGGGTCTGGTGGGTTTGGTATGGTCTACAAGGGGGTGTTCAGAGACAATGTGAAGGTTGCTGTCAAGAGAGGCATGCCAGGATCCAGACAAGGCCTTCCTGAGTTCCAGACTGAGATAACAGTTTTGTCCAAAATTCGCCATCGCCACCTTGTTTCACTAGTTGGTTTCTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCACTGAAGAAGCATTTATATGGTTCATCACAACAACCACCTCTCTCTTGGAAGCACCGTCTTGAAATATGCATTGGTGCGGCTAGAGGTCTTCACTATCTTCACACTGGTTTTGCTCAAGGAATCATCCACCGTGACATCAAGTCAACCAACATATTACTTGATGAAAACTACGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAGGTCAGGGCCATGCATCAATGAAACACATGTGAGTACTAATGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAGCAGCTTACAGATAAATCAGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAACTGGCAAGAGAGCAGGTGAATTTGGCAGAATGGGCACTTGAATGGCTGAAGAAGGGCATGCTGGAGCAAGTTGTTGACCCCCATCTTGTTGGACAGATCCAACAAAGCTCCTtgaaaaaattttgtgaaaCTGCAGAGAAATGTTTGGCTGAGTATGGTGTTGACAGGCCAGCCATGGGTGATGTCTTGTGGAATTTGGAATATGCACTTCAGCTTCAAGAAAATGGACAACAAAGGGAGCCACATGCCAATAGCAGTGCTAGTGAAGCTGTGAGTGTGACAACTACAGTTATGCCTGGAAATCCTTCTACCAACAGAAGAATAGATAGGGATTATGATAATTGTCCTTCAGATGTAAGTACTAGGCAAGTGTTTTCGCAGCTAATGAACAATGAAGGCAGATAG 2469 0.4249 MNTQNLIPFILLLFTPFSVSFSPADNFLLSCGSHSNASLFNRVFMGDSTNTGSTFLSSEDSISLTYQEPPQNLPPLYHTARVFSSTGRYRFNMKKNGTHLVRFHFSPFKAQSFDLKSAKFSVFVNGVLVLSNFKPPNDVLLKEFILKIESNLLEIFFRPVGDSGFAFVNALEVFTAPVDFVIDFGARLVGPSGVEEYRNLSSQVLETVHRINVGGMKITPFNDTLWRTWIPDEDYLVFKDAAKPAVSTHTPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNVTWNFPVSPGGVPHLVRLHFCDIVSPALNLLYFDVYINAYIAYKDLDLSALTIHTLASPVYVDFVTNSDDSGFVQVSVGPSDLSSSIRMNAILNGAEIMKMVNDIGTNIVHRRMNLWVLMGSVVGGIVVLFLVVTAFLLGTKCRNKKPKQRTVESVGWTPLSMFGGSSLSRTSELGSHGLLGMKIPFAEIQSATNNFDRNLIIGSGGFGMVYKGVFRDNVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSQQPPLSWKHRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWALEWLKKGMLEQVVDPHLVGQIQQSSLKKFCETAEKCLAEYGVDRPAMGDVLWNLEYALQLQENGQQREPHANSSASEAVSVTTTVMPGNPSTNRRIDRDYDNCPSDVSTRQVFSQLMNNEGR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0818 822 Pfam Malectin-like domain 29 387 IPR024788 -
Ssu7g0818 822 Gene3D Phosphorylase Kinase; domain 1 454 558 - -
Ssu7g0818 822 Pfam Protein tyrosine and serine/threonine kinase 488 684 IPR001245 GO:0004672|GO:0006468
Ssu7g0818 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Ssu7g0818 822 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 787 - -
Ssu7g0818 822 SUPERFAMILY Protein kinase-like (PK-like) 470 752 IPR011009 -
Ssu7g0818 822 Gene3D - 26 179 - -
Ssu7g0818 822 Gene3D - 204 390 - -
Ssu7g0818 822 PANTHER OS07G0166700 PROTEIN 15 787 IPR045272 GO:0004714|GO:0006468
Ssu7g0818 822 CDD STKc_IRAK 489 755 - -
Ssu7g0818 822 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Ssu7g0818 822 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0818 822 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0818 822 Gene3D Transferase(Phosphotransferase) domain 1 559 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0818 Ssu-Chr7 16451710 16454178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0818 21 822 Receptor kinase-like Gene Family AT3G46290 48.967 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu7g0818 Malectin_like 4.5e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0818 - - gmx:100801169 1523.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0818 7 16451710 16454178 Ssu7g0818 7 16451710 16454178 ECH
Ssu7g0818 7 16451710 16454178 Ssu7g0818 7 16451710 16454178 PCT