Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0814 ATGTCGTCGCCGGGATTCCCAGGCGGTGGAGCTTCGGATTTCTACGGCGGAGCAGCGGGATTTCCCGGTCGATCCATGGCGATTCCACCCACCATCAACAACCACCACGCCACCACGCACCACCCTCTCTACCAAACCCAACCTTCAATTTTGCTCAACCCCTCGTCCCACATCGCCCAACGCCAAACACCCACCCTCATCGGGAAACGCACCCTCGCCGAATTCCAAACCCACAaccttaacaacaacaacaacagccaACTTAACCCACTCCTTTCCAACTATTTACTACGTTCCGTGAAGCCTAGAACCTTCCAACACATGGATTTCTCCACGTCCACTCCCGAATTGTCCACCTTTCCGTCACAGCGTTACGGCGTTCcccttcaccaccaccaccaccttcgCCCTAACGCCGTTAACGCACAAACCCCATATTCGATCCTCCCCACCACAAATTTCCCTCCGGTTCACAACAGACCAACCGCAACCCACGAACCGGAGAAAAACTTGATAGACCACCGCTTACAAGAGTTGGAAAAGGAGCTTCTAGAAGATAACGACGACGAACAAGGCGACGCCGTTTCGGTGATTACCACCTCCGAATGGTCAGACACAATACAAAACTTAATCACTCCCCAGAAACCCGCATCGCCCTCGCGCACTTCCTCGACGACGTCGTCGAACTCCTCCACGACGTCGTCTAACACATCTTCGATCTGCTCCAAGCAATCCCTAACGGAGGCCGCAACGGCAATTTCGGAAGGGAAATTCGAGGCCGCGACGGAGATCCTAACCCGATTATCGCAGGCTTCGAACCCGAACAACAATTCCGATCAACGCTTCGTGAGTTGCATGGCTTCCGCGCTCAAATCGCGGATGAACCACGTCGAGCGTCCACCGCCGGTTGCGGAGTTGTTTAGCGGGGAACACGCCGAGTCGACTCAGTTGCTCTTCCAACACTCGCTCTTCTTCAAGGTCGCGCTCATGGTCGCGAACATCGCAATCCTCGAATCCGCATTCGACGACAAAACCGAGAACGCAAAGTTGTGCGTGGTGGATTTCAACATCGGGAACGGGAACCAGTACGCCAGCCTCCTCCACGAGCTTTCCTTGCGTCGGAAAGGTGCTCCGGCCGCCGTGAAGATCGCCGCGGTGGCGGAGAACGGCGCCGACGAGAGGTTGAAGACCGTGGGCGAGGTCCTGGGAAGAGACGCTCAACAACTCGGGATTGGTTTTGAATTCAAAGTGGTGAGTCCGAGACTCGCTGAGTTGACTCGCGAGTCGTTGGGTTGCGACCCGGACGAGCTTCTGGCTGTGAATTTTGCGTTCAAGCTTTATAAAATGCCCGACGAGAGCGTCTCCACGGAGAACCCGCGCGACGAGCTTCTGCGGCGCGTGAAGGCACTCGCGCCGCGCGTGGTGACGCTGGTGGAGCAGGAGGCGAACACCAATACGGCGCCGTTCGTGGCTCGCGTGGCCGAGACGTGCGCGTATTACGGCGCGCTGTTTGACTCGCTCGAGTCGACGATGTCGCGGGCGAACTCGGAGCGAGTCCAGATCGAGGAGGGACTGAGTCGGAAGGTGGCGAACTCGGTCGCGTGCGAAGGAAGGGATCGCGTGGAACGGTGCGAGGTGTTTGGGAAGTGGCGCGCGCGCATGGGCATGGCTGGGTTCAGGTTGAAACCACTGAGTCAGCGAGTGGCTGAGTCGATCAAAACGCGACTCGGTGCTGCGAGCCGAGTCGCGGTAAAAGTAGAGAACGGTGGGATTTGCTTCGGGTGGATGGGAAGAACTCTCACCGTCGCATCTGCTTGGTGTTga 1824 0.5598 MSSPGFPGGGASDFYGGAAGFPGRSMAIPPTINNHHATTHHPLYQTQPSILLNPSSHIAQRQTPTLIGKRTLAEFQTHNLNNNNNSQLNPLLSNYLLRSVKPRTFQHMDFSTSTPELSTFPSQRYGVPLHHHHHLRPNAVNAQTPYSILPTTNFPPVHNRPTATHEPEKNLIDHRLQELEKELLEDNDDEQGDAVSVITTSEWSDTIQNLITPQKPASPSRTSSTTSSNSSTTSSNTSSICSKQSLTEAATAISEGKFEAATEILTRLSQASNPNNNSDQRFVSCMASALKSRMNHVERPPPVAELFSGEHAESTQLLFQHSLFFKVALMVANIAILESAFDDKTENAKLCVVDFNIGNGNQYASLLHELSLRRKGAPAAVKIAAVAENGADERLKTVGEVLGRDAQQLGIGFEFKVVSPRLAELTRESLGCDPDELLAVNFAFKLYKMPDESVSTENPRDELLRRVKALAPRVVTLVEQEANTNTAPFVARVAETCAYYGALFDSLESTMSRANSERVQIEEGLSRKVANSVACEGRDRVERCEVFGKWRARMGMAGFRLKPLSQRVAESIKTRLGAASRVAVKVENGGICFGWMGRTLTVASAWC 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0814 607 Pfam GRAS domain family 243 606 IPR005202 -
Ssu7g0814 607 MobiDBLite consensus disorder prediction 211 242 - -
Ssu7g0814 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 607 IPR005202 -
Ssu7g0814 607 ProSiteProfiles GRAS family profile. 233 607 IPR005202 -
Ssu7g0814 607 PANTHER SCARECROW-LIKE PROTEIN 8 61 607 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0814 Ssu-Chr7 16374210 16376033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0814 68 606 GRAS Transcription Factor Family AT5G52510 49.748 9.67e-158 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ssu7g0814 GRAS 1.3e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0814 - - gmx:100800097 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0814 7 16374210 16376033 Ssu7g0814 7 16374210 16376033 ECH
Ssu7g0814 7 16374210 16376033 Ssu7g0814 7 16374210 16376033 PCT