Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0807 ATGCGTTCATGGTGGGGAAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTTTTGACACACTGCACcgaaaacttaaaatttcatctGAAGGTAAACTAAGCATTATAACTGGAGGATCCCGTAGACATTACAATGACACAATTTCAGAGAAGGGGGATCATTCTCCGTCCAAATCAAGATCATCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGTTGAAAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGTCGAGTAGATTCCGAAATTAGCATATCATCAAAATCAAGATTGGGAAAAGTCTCCAAGCCATCATTGTTTCTTCCGCTTCCAACGCCTGGATGCATCCGTTGTAGGCCAAACCCTGCAGATTTGGATGGAGATATGGTCATTGCTTCAGTCTTTAGTGATTTCTCTGCTGACAGTGATGAGCTGGCAGACTCACACAATCGTAGCCCTCTAGCAGCTGACTCTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTCGATGCTCAAGGATCAATCACCTGTTGTTTCCCAACTGAATTTAACTGGAGTAAAAAAACCACCAGCAAATGTTCTAAGTAATCATACGTCTTCTACTTCACCAAAACGGAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGATCAGGTGTTGAATTCTGCTTTTTGGGCTGGAAAGCCATATTCAGAGGTCAATTTTGTTGGATCTGGGCATTGCTCTAGTCCAGGTTCCGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACCATTATTTTGGCAACCAAGCCGGGGTAGCCCTGAGTATTCTCCTGTACCTAGTCCCAGAATGACTAGCCCTGGTCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCCACTCATCCTAAAGCTGGGGGAACACCCACTGAATCGCAGACAGGATGGGTTGATGATGGAAAACCGCAGACTCATCGTTTGCCTCTTCCTCCTTTGA 1125 0.4507 MRSWWGKSSSKETKKKANKESFFDTLHRKLKISSEGKLSIITGGSRRHYNDTISEKGDHSPSKSRSSSPSKVARCQSFVERPHAQPLPLPGLHPSSVGRVDSEISISSKSRLGKVSKPSLFLPLPTPGCIRCRPNPADLDGDMVIASVFSDFSADSDELADSHNRSPLAADSETGTRTAAGSPSSSMLKDQSPVVSQLNLTGVKKPPANVLSNHTSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYSEVNFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGQALEFRVEQSHPLILKLGEHPLNRRQDGLMMENRRLIVCLFLL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0807 374 MobiDBLite consensus disorder prediction 41 75 - -
Ssu7g0807 374 MobiDBLite consensus disorder prediction 167 224 - -
Ssu7g0807 374 MobiDBLite consensus disorder prediction 157 254 - -
Ssu7g0807 374 MobiDBLite consensus disorder prediction 288 330 - -
Ssu7g0807 374 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 333 - -
Ssu7g0807 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0807 Ssu-Chr7 16183802 16185065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0807 4 331 MAP Kinase Kinase Kinase AT1G63700 47.576 1.64e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0807 K20717 - gmx:100782929 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0807 7 16183802 16185065 Ssu2g2871 2 89881865 89886675 ECH
Ssu7g0807 7 16183802 16185065 Ssu7g0807 7 16183802 16185065 ECH
Ssu7g0807 7 16183802 16185065 Ssu7g0806 7 16176787 16183745 PCT