Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0806 ATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAGCTCTGGCTCACGTTGGAAAAAAGGGAAGCTGCTTGGCAGCGGCTCATTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGTGGCGAAATGTGTGCAATGAAGGAGGTTACCCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCTAAGCAATTTATGCAGgaaattcatttattaagCCGGTTACAGCATCCAAATATTGTCCAGTATTATGGTTCTGAAACAGTTGATGACAAGCCTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCGAGAATATGGGCAGCTTGGTGAACTAGTTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAACTGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAACATTTGACAGGGCAATCGTGTCCATTGTCATTCAAGGGAACCCCTTACTGGATGGCTCCTGAGGTTATAAAAAACTCTAGTGGATGCAACCTTGCAGTGGATATATGGAGCCTTGGATGCACAGTTTTGGAAATGGCAACGACCAAACCTCCTTGGTTTCAGTATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCAGATCATCTCTCAAATGAaggaaaagattttgtaaggaAATGTCTTCAGCGTAACCCACATGATCGCCCTTCAGCCAGTGAATTATTGGACCacccttttgtaaaatatgctGCCCCTTTGGAAAGACCTATACTGGCTCCTGAAGCGTTGGACCCTGTTTCTGGGATTACACAGGGAGCAAAAGTTCcgGGCATTGGACAAGGAAAGAATCTTTCTACGTTGGATTCAGATAGACTTTCTGTTCATTCTTctagatttttgaaaactaatccTCATGAaagTGAAATCCATATTCCGAGGAATATATCTTGCCCTGTCTCTCCCATTGGAAGCCCACTTTTGCGGTCAAGATCACCACAGCACAGGAATGGGAAAATGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGGGCATCCACGCCTCTCGCTGGGGGCAGTGGTGCCATTCCATTTGTTAATCATTCGAAACAGTCAATTTACTTTCAAGAGGGTTTTGGAAGCATGCCAAAGTCCTCAAATGGTGTCTACATTAATGGCCCTGCTCATCATGACTCCAGTGTTGACATTTTTCGAGGAGTGCAAATAGGGTCTCACATTCCATCAGAACTGGTCTCCAGTGAAAATGATGTTCTGGTTAAGCAGTTTGCAAGGCCGCCTCATGCAGAGCCATATGATTTTCAGTCAGTCTTGGCAGATCGTGTTGGCAGGCAGCTGCTGGGGGAACGTGTTAAGATTAACCCATCTCTTGATCTCAGTCCCAACTCGTCTTTGCTTAGCCGGCCAAACGGTTTATGA 1518 0.4275 MPRSPARADNPSSGSRWKKGKLLGSGSFGHVYLGFNSESGEMCAMKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVQYYGSETVDDKPYIYLEYVSGGSIHKLLREYGQLGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHLTGQSCPLSFKGTPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPHDRPSASELLDHPFVKYAAPLERPILAPEALDPVSGITQGAKVPGIGQGKNLSTLDSDRLSVHSSRFLKTNPHESEIHIPRNISCPVSPIGSPLLRSRSPQHRNGKMSPSPISSPRTASGASTPLAGGSGAIPFVNHSKQSIYFQEGFGSMPKSSNGVYINGPAHHDSSVDIFRGVQIGSHIPSELVSSENDVLVKQFARPPHAEPYDFQSVLADRVGRQLLGERVKINPSLDLSPNSSLLSRPNGL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0806 505 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 421 - -
Ssu7g0806 505 ProSiteProfiles Protein kinase domain profile. 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0806 505 MobiDBLite consensus disorder prediction 352 382 - -
Ssu7g0806 505 PRINTS Tyrosine kinase catalytic domain signature 198 220 IPR001245 GO:0004672|GO:0006468
Ssu7g0806 505 PRINTS Tyrosine kinase catalytic domain signature 132 150 IPR001245 GO:0004672|GO:0006468
Ssu7g0806 505 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Ssu7g0806 505 PRINTS Tyrosine kinase catalytic domain signature 242 264 IPR001245 GO:0004672|GO:0006468
Ssu7g0806 505 MobiDBLite consensus disorder prediction 346 383 - -
Ssu7g0806 505 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 421 - -
Ssu7g0806 505 CDD STKc_MEKK1_plant 16 273 - -
Ssu7g0806 505 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Ssu7g0806 505 Gene3D Transferase(Phosphotransferase) domain 1 14 288 - -
Ssu7g0806 505 SMART serkin_6 17 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0806 505 SUPERFAMILY Protein kinase-like (PK-like) 15 347 IPR011009 -
Ssu7g0806 505 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0806 Ssu-Chr7 16176787 16183745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0806 1 494 MAP Kinase Kinase Kinase AT1G63700 61.034 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu7g0806 Pkinase 2.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0806 K20717 - gmx:100797994 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0806 7 16176787 16183745 Ssu7g0806 7 16176787 16183745 PCT
Ssu7g0807 7 16183802 16185065 Ssu7g0806 7 16176787 16183745 PCT