Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0793 ATGAACCTCGTCATGGCTTTCGCATTCTTCTATCTAACCACGCTGGCGCCATGGCGCGTGCGCTCGGAGGATCAGAGGCTTCTCGTGAACATGACGCTCGTTCCGAACGCTCGTGCTAGCCGTGCTCTTTGTTTGGACGGAAGTTTACCGGCGTATCATTTGCACAGAGGATTTGGAGCTGGCCAAGATAACTGGCTTCTACAATTTGAGGGAGGTGGATGGTGCAATGACTTGACATCGTGCTTGGAGAGAGCCAAAACTCGCAGGGGTTCAACACGTTACATGACCAAGTGGGAGGTGTTCTCTGGTATTTTAAGCAATAATGCCACCCTTAATCCAGATTTTTACAATTGGAACCGTGTAAAGCTGAGATATTGTGATGGAGCTTCATTTACTGGAGACGCTGTGTTCACCAACAAGACAACAACACTTTATTTCAAAGGCCAAAAGATTTGGGAAGCCATTATTCGCGACCTTCTACAAAAAGGTTTGGGAAAGGCACAGCAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCGACCTTTCACCATTGTGACGACTTCGCCAAGTATTTGCCAGCGAATGCTAGTGTTAAATGCGTGAGTGATGCCGGTTTTTTTCTTGACGGAAGAGACATCAGTTTGAATCACACTATGAGATTTTTCGTCAAAAGTCTAGTTCAATTACAGGGGATAGAGCAGAACCTGAATAGAAACTGTACCAGAGCACTCTACTTTCCAGACTTGTGCTTCTTTCCACAATATGTGTTGAGATACATATCAACACCATATTTCATCTTGAACTCTGCCTATGATGTATaccaaTTCCATCACATATTGGTGCCACCCTCTGCTGATATGCACGGACACTGGAACCACTGCAGGCTGGACCCCGCGGCGTGCACGCCAGACCAAATTTATACTTTGCAAGGTTTTAGGCTCGACATGCTTGCAGCTTTGAGACCGTTCTATATGAATTCAAGAAGAGGGGGGATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACTGCAAGAAACATGGTTTGGGGCTGATTCTCCAAGAATAAACGAGAAGACTATTGCAGAAGCCGTTGGCGATTGGTATTTTAGTAGAAACAGAAGCAAGGAAATTGACTGTGCATATCCATGTGATGCAACTTGTCATAATCTTATACCAGAAGCTCAGGTAATGTcttgtataaaattatgtacTAGTTCTCTTGGATATCTTGGTGACTTTTAA 1251 0.4388 MNLVMAFAFFYLTTLAPWRVRSEDQRLLVNMTLVPNARASRALCLDGSLPAYHLHRGFGAGQDNWLLQFEGGGWCNDLTSCLERAKTRRGSTRYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFTNKTTTLYFKGQKIWEAIIRDLLQKGLGKAQQALLSGCSAGGLATFHHCDDFAKYLPANASVKCVSDAGFFLDGRDISLNHTMRFFVKSLVQLQGIEQNLNRNCTRALYFPDLCFFPQYVLRYISTPYFILNSAYDVYQFHHILVPPSADMHGHWNHCRLDPAACTPDQIYTLQGFRLDMLAALRPFYMNSRRGGMFINSCFAHCQSELQETWFGADSPRINEKTIAEAVGDWYFSRNRSKEIDCAYPCDATCHNLIPEAQVMSCIKLCTSSLGYLGDF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0793 416 Pfam Pectinacetylesterase 23 375 IPR004963 GO:0016787
Ssu7g0793 416 PANTHER NOTUM-RELATED 22 395 IPR004963 GO:0016787
Ssu7g0793 416 PANTHER PECTIN ACETYLESTERASE 9 22 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0793 Ssu-Chr7 15969661 15982620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0793 1 397 Carbohydrate Esterase AT5G23870 66.416 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0793 K19882 - gmx:100802358 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0793 7 15969661 15982620 Ssu7g0793 7 15969661 15982620 ECH