Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0788 ATGCAAGCTTCAACCACACTCTCCGGATTGCTCCATCACGTCGCCGGAATATTCCCCTCCCACCGAGCCGTCTCCGTCTCCGGCAAATTCGACCTTACGCACTCGCGCCTCCACCACCTCGTCGAAAGCGCCGCCTCGCGCCTTCTCTCCGCCGGCATCAAGCCCGGCGATGTCGTCGCCCTCACCTTCCCCAACATCGTCGAGtttataATAACGTTCTTGGCCGTTGTTCGAGCGCGAGCCACGGCGGCACCGTTGAACGCGGCTTACACAGCGGAAGAGTTCGAGTTCTATTTATCCGACTCAGAATCGAAGCTGTTACTAACGTCGAAGGAAGGCAACGAGCCGGCTCAAGCCGCGGCTTCCAAGCTTGGCGTTCCTCAAGCAACGGCCTGGCTCGCCGAGGGCGAAGCCGCGGAGCTGAGTCTCTCTCTGAGCCAGTCCGAGTCAGCGACCGACTCGGTTTCCGAACTCGCCAACGACCCGTCCGACGTGGCGCTCTTCCTGCACACCTCCGGCACCACGAGCCGCCCCAAGGGCGTGCCGTTGACGCAGCACAACTTAGCCTCTTCGGTGGAGAACATCAAAACCGTGTACAGACTCACTGAGTCCGACTCGACCGTGATCGTTCTCCCCTTGTTCCACGTCCACGGCTTGCTCGCCGCCTTGCTGAGTTCACTCGCCGCCGGAGCCTCCGTGGCGCTCCCGGCGGCGGGGAGGTTCTCCGCCTCCACGTTTTGGAGCGACATGGCGAGGTACAACGCCACGTGGTACACCGCGGTTCCTACGGTGCACCAAATCGTATTGGAGCGTCACTTGAAAAACCCGGAACGGGTTTACCCGAAGCTCCGGTTTATTCGGAGCTGCAGCGCGTCGCTTGCACCGGCTATATTGGAGCGGTTGGAGGAGGCGTTCGGGGCCCCGGTTTTGGAGGCGTATGCTATGACGGAAGCGTCACATTTGATGGCGTCGAACCCGTTGCCCGAAGATGGGCCTCACCGGGCCGGGTCCGTTGGAAAGCCCGTGGGCCAGGAAATGGCGATTTTGGATGAGGAGGGTGAGATTCGAAAGGCTGGGGTGAATGGTGAGGTTTGTATTAGGGGACCCAATGTGACCAAAGGGTATAAGAACAACCCTGATGCGAATAATGCTGCGTTTCAATTCGGGTGGTTCCACACCGGTGATATCGGGTTTTTGGATACGGACGGGTATTTGCACCTTGTGGGTCGCATCAAGGAGCTAATTAATCGTGGAggggaGAAAATATCACCAATAGAGGTGGATGCTGTCCTTCTATCTCATCCAGACATTGCTCAGGCAGTTGCATTCGGAGTGCCAGATGACAAATATGGCGAAGAGATAAATTGTGCAATCATCCCAAAAGAAGGATCAAACGTTGATGAGGCAGAGGTGCAGAGATTTAGCAAGAAGAACCTTGCAACCTTCAAAGTCCCTAAAAAGGTCTTCATTACTGATTCATTGCCCAAGACCGCAACTGGCAAGATTCTAAGGCGTCTTGTAGCAGAACACTTCGTTTCTCAAACTTGA 1548 0.5614 MQASTTLSGLLHHVAGIFPSHRAVSVSGKFDLTHSRLHHLVESAASRLLSAGIKPGDVVALTFPNIVEFIITFLAVVRARATAAPLNAAYTAEEFEFYLSDSESKLLLTSKEGNEPAQAAASKLGVPQATAWLAEGEAAELSLSLSQSESATDSVSELANDPSDVALFLHTSGTTSRPKGVPLTQHNLASSVENIKTVYRLTESDSTVIVLPLFHVHGLLAALLSSLAAGASVALPAAGRFSASTFWSDMARYNATWYTAVPTVHQIVLERHLKNPERVYPKLRFIRSCSASLAPAILERLEEAFGAPVLEAYAMTEASHLMASNPLPEDGPHRAGSVGKPVGQEMAILDEEGEIRKAGVNGEVCIRGPNVTKGYKNNPDANNAAFQFGWFHTGDIGFLDTDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPKEGSNVDEAEVQRFSKKNLATFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0788 515 Pfam AMP-binding enzyme C-terminal domain 426 501 IPR025110 -
Ssu7g0788 515 ProSitePatterns Putative AMP-binding domain signature. 168 179 IPR020845 -
Ssu7g0788 515 Pfam AMP-binding enzyme 16 417 IPR000873 -
Ssu7g0788 515 Gene3D - 1 410 IPR042099 -
Ssu7g0788 515 PANTHER ACYL-COA SYNTHETASE 1 514 - -
Ssu7g0788 515 SUPERFAMILY Acetyl-CoA synthetase-like 5 513 - -
Ssu7g0788 515 CDD FACL_fum10p_like 19 509 IPR045310 GO:0016874
Ssu7g0788 515 Gene3D - 411 513 IPR045851 -
Ssu7g0788 515 PANTHER OXALATE--COA LIGASE-LIKE 1 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0788 Ssu-Chr7 15760666 15764557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0788 4 514 Monolignol Biosynthesis Gene Families AT4G05160 29.735 9.93e-60 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0788 K22133 - gmx:100783685 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0788 7 15760666 15764557 Ssu7g0788 7 15760666 15764557 ECH
Ssu7g0788 7 15760666 15764557 Ssu7g0788 7 15760666 15764557 PCT