Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0759 ATGATCTCTTTTGGCATTGCCACTGTACTCTACTTCTTCTCTCTCATACCAAATCCTTCACTTCGTAACAATGCCTCGCTTTCGTGCTCCATCTTCTGCTACTCATTATCTTCAACCCTCTCCAACGCCATTTGCATGCTCCAAATTCCCCTAAACAAACCAAACCCCTCTCCTCTTCTTCTTACCTCTGTGTCTGTCTTCTTCCATGGCTCTACCTCTACCCCTCAACCTCGTGCTCTCGTGCTTTGCGGTGTTTCACTTTTGTGTGCCATTGCAGACCAAAGCCCCGAGAAGCTTTCCCTCCTTTCTTTCAAAGAGGGTCTCCAAAACCCTCACTTGCTCCCCTCGTGGCAACCCGCCACCCCGCACTGCGGCTGGGTCGGCGTCACGTGTCAACTCGGCCGAGTCACCTCGCTCTCTCTTCCCAACCGCAACCTCAGAGGAACGCTCTCTCCGTcgctcttctctctctcttcgcTCTCCCTCCTCAACCTCCGCGACAACCAGCTCTCCGGCGAGATCGCCGCCGAGCTCGGCGGGCTGCGCCAGCTCGAGACTCTCCGTCTCGGCTCCAACTCGCTCGCCGGAAAAATCCCGCCGGAGGTGGGGCTCCTGACGAAACTCCGCACCCTCGACCTCTCCGGCAACGGGCTCGGCGGAGAACTGCCGGAGAGCGTCGGAAACTTGACCCGGCTTGAGTTTCTCGACCTGAGCAATAACCTTCTCTCAGGTTCTCTTCCGGTGACTCTGTTCGCCGGAGCGAGGTCCTTGATTTCCGTCGATATCACGAACAACTCGTTTTCCGGCGCGCTTCCGCCGGAAATCGGGAACTGGAGGAATATCACTGCCCTTTACGTGGGGGTTAACAAGTTGTCTGGGACTTTGCCGAGGGAAATTGGGTTGCTCTCAAAACTTGAAATTTTCTGCTCCCCTTCCTGTTTCATCGAGGGTCCTTTGCCTGAAGAAATGGCGAAGCTGAAATCGTTGACCAAGCTTGACCTTTCTAACAACCCCTTGAGGTGTTCGATTCCGAGGTTCATTGGGGAGTTGGAGAGTTTGAGAATGTTGGACCTTGTGTTTGCCCAGCTTAATGGGTCAGTGCCAGCCGAGCTTGGGAACTGTAAGAATCTGATGTCTGTGATGCTTTCTTTCAATTCACTTTCTGGGTCACTGCCTGAGGAGCTTTCTGAGCTTCCCATAATAACCTTTTCTGCTGAGAAGAATCTGCTTCATGGGCCTTTGCCTTCTTGGCTGGGGAAGTGGAGTGATGTTGATTCTCTTTTGCTTTCTGCTAACCGTTTTTATGGGGTGATTCCTCCTCAGCTTGGGAATTGTTCTGTGATGGAGCACATCAGTTTGAGCAGTAATTTGCTGACAGGTCCCATTCCTGAGGAGCTTTGTAATGCTGCCTCACTTTCGGAGGTTGAGCTTGATGGCAATTTCCTTTCTGGTACTATTGAGAAAGTGTTTGTTAAGTGTAAGAACCTTACTCAGTTGGTTTTAATGAATAATCAGATTGCTGGTTCTATACCTGAGTATCTTTCTGAGCTTCCCTTGATGGTGTTGGACCTTGATTCTAACAATTTTAGTGGGAAAATACCTTCTGGTCTGTGGAATTCATCCAATCTGATGGAATTCTCTGCTGCTAATAACCGTTTGGAGGGTTCTCTACCTGTGGAGATTGGGAATGCGGTTGTTCTGGAGAGACTTGTTCTTAGCAATAACCGTCTGACAGGTACTATACCTAAGGAAATTGGAAGTCTCTCAAGTCTTTCAGTTCTTCATTTGAATGGGAATATGCTTGAGGGGAATATTCCAACTGAGCTTGGTGATTGCAGTTCCCTTACTACACTGGAGCTTGGAAACAATCAGCTGAACGGGTCTATTCCTGAGAAACTGGTGGAACTGAGCCTATTGCAGTGCCTGGTTCTTTCTCACAATAATCTGTCTGGGTCTATTCCTGCCAACAAGTCTTCATATTTTCAACAATGTAGCATCCCTGATTTGAGCTTTGTTCAGCACCATGGTGTGTTTGATCTTTCTCACAATAGATTGTCTGGCCCCATACCTGATGAACTTGGGAGCTGTGTAGTCGTTGTGGATCTCTTACTCAGCAACAACATGCTTTCTGGGAGCATTCCTAGATCGCTCTCACGCTTGACGAATCTTACAACCTTGGATTTGTCTGGCAACTTGTTGTCAGGTTCCCTTCCTCCAGAGCTTGGAGGTGCCCTCAAACTCCAGGGTTTGTATCTGGGACAGAATCACCTATCAGGTACCATCCCTGAAAGCTTTGGGAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCAATTCCGGTTAGTTTTGGGAACATGAAGGGGTTGACTCACTTGGACTTGAGCTTTAATGAGCTCAGTGGTGAGCTTCCATCCTCTCTTTCAGGAGTGCAAAGCCTTGTTGGGCTTTACGTGCAGAGTAACAGGCTTTCAGGCCAAGTAGAGGACCTCTTCTCAAACTCCATGACATGGAGGATTGAGACAGTGAATTTAAGTGACAATTGCTTCAATGGGAACTTGCCGCAGTCTTTAGGAAATCTATCTTACTTGACAAATTTGGATCTTCATGGAAATATGTTGACTGGAGAGATTCCCGTAGACCTTGGGGATCTAATGCAACTGGAGTATTTTGATGTTTCACGTAATCAGCTATGTGGAAGGATTCCAGACAAGTTATGCAGCCTGGTTAATCTGAATCACCTAGATTTGTCTCAAAACAGGTTGGATGGGCTGATACCGAGAAATGGTATTTGCCGGAACCTATCCAGAGTTAGATTTGCAGGGAACAAAAACCTTTGTGGCCAGATGTTGGGTATAAATTGTCAGGCTAATAGCATTAGCAGATCAGCATTGTATAATGCATGGCAGCTTGCTGGAATTGCTGTTACAATCACATTACTAACTCTAAGCATTGTTTTTGTTCTACATAGATGGATTACCAGGAAGCAACATGAtcctgaggagcttgaggagcGCAAACTAAACAGTTATGTTGATCACAATCTTTATTTCTTGAGCAGTAGCAGATCAAAGGAACCTTTGAGTATCAATGTTGCAATGTTTGAACAGCCTCTTCTGAAATTAACTTTGGTGGATATCCTTGGAGCCACTGACAACTTCAGCAAGACAAATATAATTGGAGATGGAGGTTTTGGAACAGTGTACAAGGCCACTTTACCTAATGGAAAAACAGTTGCTGTGAAGAAACTTAGCGAGGCTAAAACGCAGGGTCATCGTGAGTTCATGGCGGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAATCTTGTTGCATTGCTTGGATATTGCTCAATGGGCGAGGAGAAAGTCCTTGTTTACGAATATATGGTAAATGGGAGTTTAGACCTTTGGTTGAGAAATAAAACTGGGGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAAATTGCAACTGGCGCAGCTCGAGGATTAGCTTTCCTTCATCATGGTTTCATACCTCACATCATTCACAGGGATGTTAAAGCTAGCAACATCTTACTCAATGAAGATTTTGAGCCAAAGGTTGCAGACTTTGGACTGGCAAGGCTGATCAGTGCCTGTGAGACTCATATCACCACTGATATTGCCGGAACATTTGGTTACATTCCACCAGAGTATGGCCAGAGTGGGAGATCCACAACAAGAGGAGATGTATACAGTTTTGGTGTCATTTTGCTTGAACTGGTGACTGGGAAAGAGCCAACAGGACCAGATTTTAAAGAGATTGAAGGTGGAAACTTGGTTGGATGGGTTAGTCAGAAGACCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCAACCGTTCTTGATGCTGACTCAAAGCAGGTGATGCTACAAATACTGCAAATTGCCTGTGTGTGCCTCTCTGATAATCCTGCAAACAGGCCTACCATGCTTCAAGTGCACAAATTGTTGATGGGAATGAAGGGAGAGAGTAGTTGA 4020 0.4597 MISFGIATVLYFFSLIPNPSLRNNASLSCSIFCYSLSSTLSNAICMLQIPLNKPNPSPLLLTSVSVFFHGSTSTPQPRALVLCGVSLLCAIADQSPEKLSLLSFKEGLQNPHLLPSWQPATPHCGWVGVTCQLGRVTSLSLPNRNLRGTLSPSLFSLSSLSLLNLRDNQLSGEIAAELGGLRQLETLRLGSNSLAGKIPPEVGLLTKLRTLDLSGNGLGGELPESVGNLTRLEFLDLSNNLLSGSLPVTLFAGARSLISVDITNNSFSGALPPEIGNWRNITALYVGVNKLSGTLPREIGLLSKLEIFCSPSCFIEGPLPEEMAKLKSLTKLDLSNNPLRCSIPRFIGELESLRMLDLVFAQLNGSVPAELGNCKNLMSVMLSFNSLSGSLPEELSELPIITFSAEKNLLHGPLPSWLGKWSDVDSLLLSANRFYGVIPPQLGNCSVMEHISLSSNLLTGPIPEELCNAASLSEVELDGNFLSGTIEKVFVKCKNLTQLVLMNNQIAGSIPEYLSELPLMVLDLDSNNFSGKIPSGLWNSSNLMEFSAANNRLEGSLPVEIGNAVVLERLVLSNNRLTGTIPKEIGSLSSLSVLHLNGNMLEGNIPTELGDCSSLTTLELGNNQLNGSIPEKLVELSLLQCLVLSHNNLSGSIPANKSSYFQQCSIPDLSFVQHHGVFDLSHNRLSGPIPDELGSCVVVVDLLLSNNMLSGSIPRSLSRLTNLTTLDLSGNLLSGSLPPELGGALKLQGLYLGQNHLSGTIPESFGKLSSLVKLNLTGNKLSGPIPVSFGNMKGLTHLDLSFNELSGELPSSLSGVQSLVGLYVQSNRLSGQVEDLFSNSMTWRIETVNLSDNCFNGNLPQSLGNLSYLTNLDLHGNMLTGEIPVDLGDLMQLEYFDVSRNQLCGRIPDKLCSLVNLNHLDLSQNRLDGLIPRNGICRNLSRVRFAGNKNLCGQMLGINCQANSISRSALYNAWQLAGIAVTITLLTLSIVFVLHRWITRKQHDPEELEERKLNSYVDHNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILGATDNFSKTNIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSMGEEKVLVYEYMVNGSLDLWLRNKTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKTKKGQAADVLDPTVLDADSKQVMLQILQIACVCLSDNPANRPTMLQVHKLLMGMKGESS 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0759 1339 Pfam Leucine rich repeat N-terminal domain 96 131 IPR013210 -
Ssu7g0759 1339 ProSitePatterns Protein kinases ATP-binding region signature. 1065 1088 IPR017441 GO:0005524
Ssu7g0759 1339 Gene3D Phosphorylase Kinase; domain 1 1022 1134 - -
Ssu7g0759 1339 Pfam Leucine Rich Repeat 795 815 IPR001611 GO:0005515
Ssu7g0759 1339 Pfam Leucine Rich Repeat 328 349 IPR001611 GO:0005515
Ssu7g0759 1339 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515
Ssu7g0759 1339 Gene3D Transferase(Phosphotransferase) domain 1 1135 1339 - -
Ssu7g0759 1339 SUPERFAMILY L domain-like 671 953 - -
Ssu7g0759 1339 Gene3D Ribonuclease Inhibitor 252 402 IPR032675 -
Ssu7g0759 1339 Gene3D Ribonuclease Inhibitor 662 963 IPR032675 -
Ssu7g0759 1339 SMART serkin_6 1059 1331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0759 1339 Gene3D Ribonuclease Inhibitor 403 553 IPR032675 -
Ssu7g0759 1339 SUPERFAMILY Protein kinase-like (PK-like) 1040 1331 IPR011009 -
Ssu7g0759 1339 SUPERFAMILY L domain-like 407 661 - -
Ssu7g0759 1339 SUPERFAMILY L domain-like 123 401 - -
Ssu7g0759 1339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1181 1193 IPR008271 GO:0004672|GO:0006468
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 94 192 - -
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 404 837 - -
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 94 192 - -
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 181 420 - -
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 846 1337 - -
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 404 837 - -
Ssu7g0759 1339 Gene3D Ribonuclease Inhibitor 554 661 IPR032675 -
Ssu7g0759 1339 Pfam Leucine rich repeat 567 625 IPR001611 GO:0005515
Ssu7g0759 1339 ProSiteProfiles Protein kinase domain profile. 1059 1331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0759 1339 PRINTS Leucine-rich repeat signature 720 733 - -
Ssu7g0759 1339 PRINTS Leucine-rich repeat signature 232 245 - -
Ssu7g0759 1339 Pfam Protein tyrosine and serine/threonine kinase 1062 1331 IPR001245 GO:0004672|GO:0006468
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 181 420 - -
Ssu7g0759 1339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 846 1337 - -
Ssu7g0759 1339 SMART LRR_sd22_2 493 516 - -
Ssu7g0759 1339 SMART LRR_sd22_2 720 735 - -
Ssu7g0759 1339 SMART LRR_sd22_2 612 638 - -
Ssu7g0759 1339 SMART LRR_sd22_2 792 818 - -
Ssu7g0759 1339 SMART LRR_sd22_2 326 352 - -
Ssu7g0759 1339 SMART LRR_sd22_2 866 887 - -
Ssu7g0759 1339 SMART LRR_sd22_2 914 932 - -
Ssu7g0759 1339 SMART LRR_sd22_2 205 231 - -
Ssu7g0759 1339 Gene3D Ribonuclease Inhibitor 94 251 IPR032675 -
Ssu7g0759 1339 SMART LRR_typ_2 720 744 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 768 791 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 588 612 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 816 839 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 866 890 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 205 228 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 914 939 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 613 636 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 792 815 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 229 253 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 326 350 IPR003591 -
Ssu7g0759 1339 SMART LRR_typ_2 157 181 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0759 Ssu-Chr7 15310983 15315002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0759 91 1331 Receptor kinase-like Gene Family AT5G07280 59.663 0.0 1431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Ssu7g0759 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0759 - - gmx:100780446 2117.81