Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0747 ATGAGACACTGTCACGTCATCAATAATAACCCACCGACTAAGCTCCCCCATCGCACTCGAGACACGTGTCTCATCGTTGACCGGGTAGGGCCGGTAAAAGAATGGATAGAGACCGGCACAGTCGGTCACTCGCACAGTGTCATTCCCGCGAGATCCGTGTCTGGAATTGTTCATAGTTCAGGACAACGTAGAGATATCTACATACAAGTCAGGCTGGCTCTGGATAGCTACTTAGACTCCAGTCACCAAGCAGTGGTGCCCCCGATGGCACCTTCTCGGGTGGCTGGAGGCTTAACCCAATCATCCTCAAGTTCTGGAATATTCTTTCAAGGAGATGGGCAGTCACAAAATGTTGTTAACTCTCACTTGAGCTCATCTTTTGGTAACTCATCTAACGTGATTCCTGGAACTGGGCGTTCAAATCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTAAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTTACAGATGCTAATTCTGCGCTTTCTGGAGGTGGTCCCCATTTGCAGAGAAGTGCAAGCTTTAACACAGATTCATACTTACGTTTACCTGCCTCACCCATGtcattttcttcaaataatGTTAGTATTTCAGGGTCATCAGTTATGGATGGTTCTTCTGTAGCACAGCAAAACTCTCATCAAGACCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCTGCCTCAAGGTGCTTCAACTGCTTCACCTCTGCTTCCATCTCAAACTGGTCCAGCTCCACTTCCAATGGCTGCACGAGTACCAGGATCTTTCGTTCAAGATGCAAATAATTTATCCCAGCTGCAAAAGAAACCCCGTCTGGATATCAAGCAGGAAGATATAATGCAACAGCAGGTAATACAACAGCTTCTTCAGAGACAAGACCCCGTGCAATTCCAGGGTCGTAATCCACCATTACAGGCCTTGCTTCAGCAGCAGCAGAGACTAAGGCAACAACAAATGTTTCAATCAATGCCGCAGCTACAGCGAGCGCACTTGcaacagcagcagcagcaacatcaacagcagcagcagcagcaacaacaaaTGCAATTCAGGCAGCAATTACATCAACAAGCAATGCAGCCATTATCTGGTGCAAAGCGCCCATATGATGGTGGTGTTTGTGCCCGTCGATTGATGCAATATCTTTATCATCAAAGGCAAAGACCAAATGATAATACTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCCCGGGCAAAGAAACGGTGGTGCTTGTCACTATATGATAATGTTGGTCATCATGCACTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAATGTGACTTATGCAGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCTAGACTGAATGAAATCAAATTTGGCAGTGGTGTGATCGATGAACTTCTGTTTTTGGACTTGCCACGTGAATGTAGATTTCCTTCTGGTTTATTGATGATAGAATATGCAAAAGCAGTTCAAGAAAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGTATCATATTCACACAAGATCTGAAGATATTATCTTGGGAATTTTGTGCTAGGCGTCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTGGTTCAAGTAGCTCAAAAATGCCAGAGTACACTTGCAGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAAACAAACAGCAATATGGTATTGACAGCTGGACGACATCTTGCAAAGAGTTTGGAGTTACAGTCGCTAAATGACTTGGGTTTCTCCAAAAGATATGTGAGATGTTTGCAGATTGCTGAGGTTGTTAATAGCATGAAAGATCTGATAGATTTCTGTGCGGAGCACAAAGCTGGTGCAATTGAAAGCTTGAAAAATTTTCCTCGACATGCAAATGCAGCCAAGCTTCAGATGCAAAAGATGCAGGAGATGGAACAACTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACACTTAATAAGCTAATGGCAATGCATCCTGGCTTgaacaacaaaatcaacaataaCCATAATATGGGTAATCGAGGTGCTTTAAGTGGATCGGCACAAGCTGCTTTGGCACTGACCAACTATCAGAATCTTCTCATGAGACAAAACTCAATGAATTCAAATTCTGGCTCTGTTCAGCGAGAAGGATCATCTTCTTTCAATAATTCAAACCAGAGTCCATCTTCAACCTTGCAAGGTGCAACTGCAGCTGCTGCTTTAATTCCGGGCTCAATGCAGAATTTACCTGTAGGTGGTTTCTCAAGTCCCCATCTGcaacagcagcagcagcagcagcagcaactTCAACAGCGCTCTCTAAATGCAAATAGCTTACTGCAACAAAGTCATTCACAGGGCTCCCAAGGAAATCAGGCTCTACAACAGCAGATGTTCCAGCAACTGCTGCAGGAGATGTCTAATAATAGTGGTACGGTGCAACCTCAGTCCCTTGGTGGACCCAATGCAAATGGGAGGATAGCAAATAATGGGCGGGGCTTAGGAGGCCAGACTCCATCTGTAACTGGAGGTACTACTAATGTTTCAGGAAGTAATGGACCTGTTCCTAGCCGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCAGAGAACAGCTGATATGCCACAAAATCTCCATTTGCCAGAAGATGTGGTTCAGGATATTGGCAATGATTTCGTGGATAGTGACTTTTTTAACAGTGGTCTAGATGACAACATGGGTTATGGCTGGAAGGCTTGA 2871 0.4291 MRHCHVINNNPPTKLPHRTRDTCLIVDRVGPVKEWIETGTVGHSHSVIPARSVSGIVHSSGQRRDIYIQVRLALDSYLDSSHQAVVPPMAPSRVAGGLTQSSSSSGIFFQGDGQSQNVVNSHLSSSFGNSSNVIPGTGRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGGPHLQRSASFNTDSYLRLPASPMSFSSNNVSISGSSVMDGSSVAQQNSHQDQNVQQLQQNQQLPQGASTASPLLPSQTGPAPLPMAARVPGSFVQDANNLSQLQKKPRLDIKQEDIMQQQVIQQLLQRQDPVQFQGRNPPLQALLQQQQRLRQQQMFQSMPQLQRAHLQQQQQQHQQQQQQQQQMQFRQQLHQQAMQPLSGAKRPYDGGVCARRLMQYLYHQRQRPNDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDLCSSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGLLMIEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTLAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCLQIAEVVNSMKDLIDFCAEHKAGAIESLKNFPRHANAAKLQMQKMQEMEQLANVQGLPTDRNTLNKLMAMHPGLNNKINNNHNMGNRGALSGSAQAALALTNYQNLLMRQNSMNSNSGSVQREGSSSFNNSNQSPSSTLQGATAAAALIPGSMQNLPVGGFSSPHLQQQQQQQQQLQQRSLNANSLLQQSHSQGSQGNQALQQQMFQQLLQEMSNNSGTVQPQSLGGPNANGRIANNGRGLGGQTPSVTGGTTNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTADMPQNLHLPEDVVQDIGNDFVDSDFFNSGLDDNMGYGWKA 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0747 956 MobiDBLite consensus disorder prediction 781 805 - -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 338 366 - -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 841 917 - -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 841 856 - -
Ssu7g0747 956 Pfam LIM-domain binding protein 394 654 IPR029005 -
Ssu7g0747 956 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 93 243 - -
Ssu7g0747 956 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 268 773 - -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 215 256 - -
Ssu7g0747 956 Coils Coil 791 811 - -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 738 766 - -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 863 917 - -
Ssu7g0747 956 PANTHER LIM DOMAIN-BINDING PROTEIN 93 243 IPR029005 -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 780 805 - -
Ssu7g0747 956 Coils Coil 345 368 - -
Ssu7g0747 956 PANTHER LIM DOMAIN-BINDING PROTEIN 268 773 IPR029005 -
Ssu7g0747 956 MobiDBLite consensus disorder prediction 215 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0747 Ssu-Chr7 15042921 15049928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0747 386 660 C2H2 Transcription Factor Family AT1G43850 59.273 1.17e-108 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0747 - - gmx:100816886 1173.69