Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0740 ATGGATGGCAACCCTTTTGGAAACGTGCCACCCCCTCCAATACAAGTCCCTGACAACCTCGCTCTCTCTTCCTCCTCGTCCGCACCAACCACGCCGACCCCAACGGCGTCGTCACCGTCTCCGACGCCCTCCGGCGTCCTCCGCTACCGGGGAACGCGCTGCCGGAGCGGGAAGTGGGTGTCGGAGATAAGGGAGCCACGTAAAACGAAGCGCATTTGGCTCGGGACTTACCCGACGGCGGAAATGGCTGCGGCGGCTTATGATGTCGCGGCGCTCGCGCTGAAGGGACCCGACACGCCCCTCAACTTCCCCAGTTCGATACTCTCGTACCCGATTCCCGCGTCATTGTCCGCCACCGATATTCGCGCCGCGGCTGCGGCTGCGGCGCAAGGTAGGATCATGGGGGCGCCGCAGGAGAGTGGGGAAACGGTTAACCCTGATAGTGGACAAGGGTCGGAGATGCGTGAGGAGTATATTGATGAGGATGAGTTGTTGAACATGCCGAATTTGCTCGATGATATGGCCAGGGGAATGCAGGTCAGTCCCCCTAGGATCGCTTCCTTTTCCTCGGATGATTCGCCTGGGAATTCTGATGGAGATAACCTTTGGAGTTATACCCTTTGA 624 0.5946 MDGNPFGNVPPPPIQVPDNLALSSSSSAPTTPTPTASSPSPTPSGVLRYRGTRCRSGKWVSEIREPRKTKRIWLGTYPTAEMAAAAYDVAALALKGPDTPLNFPSSILSYPIPASLSATDIRAAAAAAAQGRIMGAPQESGETVNPDSGQGSEMREEYIDEDELLNMPNLLDDMARGMQVSPPRIASFSSDDSPGNSDGDNLWSYTL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0740 207 MobiDBLite consensus disorder prediction 18 33 - -
Ssu7g0740 207 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 34 205 - -
Ssu7g0740 207 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Ssu7g0740 207 MobiDBLite consensus disorder prediction 183 207 - -
Ssu7g0740 207 Pfam AP2 domain 53 96 IPR001471 GO:0003700|GO:0006355
Ssu7g0740 207 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Ssu7g0740 207 ProSiteProfiles AP2/ERF domain profile. 42 104 IPR001471 GO:0003700|GO:0006355
Ssu7g0740 207 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 34 205 - -
Ssu7g0740 207 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Ssu7g0740 207 MobiDBLite consensus disorder prediction 172 207 - -
Ssu7g0740 207 MobiDBLite consensus disorder prediction 1 17 - -
Ssu7g0740 207 MobiDBLite consensus disorder prediction 1 49 - -
Ssu7g0740 207 SMART rav1_2 48 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0740 Ssu-Chr7 14883016 14883639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0740 49 205 AP2-EREBP Transcription Factor Family AT5G52020 57.988 1.91e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ssu7g0740 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0740 - - gmx:100776717 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0740 7 14883016 14883639 Ssu7g0740 7 14883016 14883639 ECH