Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0737 ATGGCTGTTGCCAAGAGCAACAGCAGCAGTGAACATTCAACTTCATACAATTGTTACAAAGTAGCAAGCTTGACTGAAACCATATTAGACACAAACCAAATCTCTAATTTGAAAGATCGATACGTTCTTGGAGAGCAGTTGGGCTGGGGGCAGTTTGGTGTCATAAGAGCATGCTCTGACAAGCTTACCGGAGAGGTGTTGGCCTGCAAATCTATTGCTAAAGATAGGTTGGTTACTACGGATGATCTGCAGAGTGTTAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAAGTGGTTTATGAAGAGGAAGATTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGAGAGTTGTTTCATCTGTTGGAGAAGCATGGACGGTTTTCAGAATCTGAAGCCAGGGTTCTCTTTAGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTGACAACTAGATCTTCTTCATCTCCAATTAAATTGGCGGACTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCGGAGGTACTGGCGGGTGCATATGACCAGGCTGCTGATGTTTGGAGTGCAGGTGTCATTCTTTACATTCTACTGAGTGGGATGCCTCCATTTTGGGGGAAGACAAAGTCACGGATATTTGAAGCTGTTAAGACTGCTAACCTGAGGTTCCCATCTGAGGCTTGGGATTATGTTTCTGAATCAGCTAAGGATTTGATTAGGGGAATGCTCTGCATAGAATCTTCTCAAAGGCTCACTGCCAAGGAGGTTTTGGATCATTGCTGGATGGAAAACAATCAAACAAATCCTGAACAACTAAGTGAACGTAAAATCACAAGTTGTGGAAAGTGGGATGTTGGTAGCAACTCATTCTCTACCTCGTTAATGTCCAGGGATAAGGACATCAGCTTTGGCGCTGGATCTCCTACATGTGGTGCTCAATCGCCTACATTCACATgcaaatcatcattttcttccttttttgagGAACCAGTGACACCTTGTTCTGTTTCTGTTGGATTTTCATTTCAGAGCTCTGGTGGTTCCACTGATTTGGACTTTTCTTCTACTGTCCCCTCAATGCCTACCTTTGCATTTCTCGGCCCCAGTTCTGTTGTTGAGCAAAGGGGCTGTATATCAGAGTTCCCAACTAACACGTCAAATGTAAATGCAATTGCTGGAGATTCTCCCCTTTGCTTTGGACATGATGTTAAAGAGATGGATCGCAAGCCTGTAGAGGGTAAAAGGCCAGGTGGAACATATGGCCATAGGGCATTGGGATTCCACAACAAGAGAAACTGGACAATTGGACTCGGCGACCGTGAGCAACTTGATCTTGTGGTGACTGAATCAGTCATTCGGTGGTCATCTTGCACCCAACTTCCAACATCACCGAGATCATTTCTTGTTTGTTGA 1524 0.4344 MAVAKSNSSSEHSTSYNCYKVASLTETILDTNQISNLKDRYVLGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTTDDLQSVKLEIEIMARLSGHPNVVDLKVVYEEEDFVHLVMELCAGGELFHLLEKHGRFSESEARVLFRHLMQMVLYCHENGVVHRDLKPENILLTTRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYDQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKTANLRFPSEAWDYVSESAKDLIRGMLCIESSQRLTAKEVLDHCWMENNQTNPEQLSERKITSCGKWDVGSNSFSTSLMSRDKDISFGAGSPTCGAQSPTFTCKSSFSSFFEEPVTPCSVSVGFSFQSSGGSTDLDFSSTVPSMPTFAFLGPSSVVEQRGCISEFPTNTSNVNAIAGDSPLCFGHDVKEMDRKPVEGKRPGGTYGHRALGFHNKRNWTIGLGDREQLDLVVTESVIRWSSCTQLPTSPRSFLVC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0737 507 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0737 507 SUPERFAMILY Protein kinase-like (PK-like) 38 358 IPR011009 -
Ssu7g0737 507 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 502 - -
Ssu7g0737 507 CDD STKc_CAMK 40 298 - -
Ssu7g0737 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Ssu7g0737 507 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0737 507 Gene3D Transferase(Phosphotransferase) domain 1 128 330 - -
Ssu7g0737 507 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Ssu7g0737 507 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0737 507 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Ssu7g0737 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0737 Ssu-Chr7 14827024 14830166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0737 37 306 EF-hand Containing Proteins AT3G57530 49.630 3.02e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ssu7g0737 Pkinase 3.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0737 - - gmx:100776088 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0737 7 14827024 14830166 Ssu7g0737 7 14827024 14830166 ECH