Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0736 ATGGCTAGCAGATTTTCAAGAAGCACTAGCGCATATGGCTTGGCACCTTCAATGAGGAAGATGAGGCCACCACAGCTTATAACATCATCGCACAAAGGTTTTGCGGCCGCGATGCCATCACAAACTTCAAGCCCATCACCAGTGCTGGTGATGACGTCGAATCTGAGTTCCTCAACTTGCATTCCAAGTCCAAGATTGTCGACATGCTCCATAAGCACACTTATGACGACAAGCTCCAATAAAGCACAAGCAATAGGAGGAGTCGCTGTAATGGCAAGACGAACACGTTCGCCGTTAAGGGGTGCGTGCAATGTGAAGGAGCATGAGCAGCTGTTCAAGAAAACAGTTAAGCCAAGCAATGTTGGGAAGTTGAATTTGCTAGTGATACCAAAGCAACATGCGGAGAAGCACTTTTCATTGGGCGGCAACAAACCTCGTCGTGCGTGGCAACAGTAA 456 0.4803 MASRFSRSTSAYGLAPSMRKMRPPQLITSSHKGFAAAMPSQTSSPSPVLVMTSNLSSSTCIPSPRLSTCSISTLMTTSSNKAQAIGGVAVMARRTRSPLRGACNVKEHEQLFKKTVKPSNVGKLNLLVIPKQHAEKHFSLGGNKPRRAWQQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0736 151 Gene3D - 101 149 IPR015300 -
Ssu7g0736 151 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 95 143 - -
Ssu7g0736 151 SUPERFAMILY DNA-binding pseudobarrel domain 110 140 IPR015300 -
Ssu7g0736 151 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 95 143 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0736 Ssu-Chr7 14795096 14795551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0736 105 140 B3 DNA Binding Superfamily AT1G25560 72.222 3.71e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0736 K09287 - gmx:100801107 65.4698