Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0734 ATGGAGGAGGAGTTCGGTTGGGATTTTGGTGTGGGTGGGAACCGTAGAGTGTTGTCGGAGTCCAAGAGAGCTGTTATGAAATCGAAATCGTCGAAGGGTTTGTTGGATGGATCTTCTGTGCCGCAATTGTTACAGGTAAAAATGGACGAGACTGGTGTTCCTTTGTCTCTTGATTTGCatGCAATTGCCCCATTTTCCTTCATTGACTATTTCCTTTACAAGATCAATGATGATCAAAGTCTAATTGGAGCTTCAATTTTACAATCCATCCAGCCTATACTGAGTACTGTAAGAGGAATTGACTTCTTAGAGTTCAGACCCTCAGAGATTGCAGTAGCAATGGCAATATCTGTGGTGAGGGAGGCCCAAACAATTCACACTGAGAAAGCAATTTCTGTTCTAATTCAGCTTGTAGAAGGGGTAAATATGGTGGTGGTCCAATGA 444 0.4279 MEEEFGWDFGVGGNRRVLSESKRAVMKSKSSKGLLDGSSVPQLLQVKMDETGVPLSLDLHAIAPFSFIDYFLYKINDDQSLIGASILQSIQPILSTVRGIDFLEFRPSEIAVAMAISVVREAQTIHTEKAISVLIQLVEGVNMVVVQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0734 147 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 60 136 - -
Ssu7g0734 147 PANTHER CYCLINS 60 136 IPR039361 -
Ssu7g0734 147 Gene3D - 43 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0734 Ssu-Chr7 14758408 14759904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0734 55 141 Core Cell Cycle Gene Families AT5G65420 47.191 2.65e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0734 K18810 - gmx:100803873 137.502