Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0725 ATGGGCAAGGAGTGGAATTGGGGTGGAAGGTCCTCCAAGAGAAGTGGAGCAGCTGAAACGGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAAGCCTTTGATTTTCATCCATTTCACTTTTCCGTAAACCAGCAACAATCCTCTTTCAAATCTGCCTCCTCTCGCACCCAAGAAGACCACACTGTCCCCAAAGGAGCTGAAGCGCAAAGGAATAGCTTGGAATCAGAAGATGGCACAGCGTCATCAatctcaaaagaagaaaatttaaaaatacgaAAGAATATTCGAATCAAAATAAGTGGGAGCACAAGATCAAGAACGGGAAGTTTTAGTGATCTTTCCTCAGAAATCAGTGCCTCTCCAGGGACCAAGACACCAACTTTGGTAGCCAGATTAATGGGTCTTGATCTTCTTCCCGATGCACATTCCTCTTCCTCCTCGTGCCTTTCCACTCCAAACCAACAAGGTCATAGACCACGGCAAcacatcaaaataatcaaacataGAAACAGCACAGGCAGTGACACCTTGCCTGAGACTCCTAGAATGTCCTCTGCAAGAAGATCAGATGTTGAGCATCGATTATCTCTCCAACTCAACAAGGAGAACACAGTCCCTTATGAGGATTTTGAGGTTCCCCGGTTGTCATTTTCAAAGAGGAAATATTATGATGAGAACAATAGCAGGAGTCCAAGCCACTATGCCAGGCAAATTGTCAAACAGGTAAAAGAAAGTGTGAGCAGGAAGGTTGGACTTGATATCACTAACACTGTCAAGAACAGAGAACAAGGAAGAGAAGAATTTGTTGGCCAATTCAAATTCAAGAAACATCCCAAAACATCAGTGAATGAATCCAGCCCAGGAAAGCACTCAAACCCATCTTACTCCCCAAGGCTGAGCAGATTCATTGATTCCAAACACAACAAACCAAGCACAACACCATCATCAACTActccaaaaaatcaaaacacacaCTCAGTACTTAAACCACCATCACCTCCACCTGTGTTCAACATTGAAACACAGCTTTCAAGAGTCTCAACCAGGCCAATGCCTCAAGCATTGCCTGAGAAGGAGTTGCGGAACAAAAAACCAGTCACAAAATGCAAGAAAACCACCCCTGGAAAGTTGAGTTCCCGAGTCAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTTATCATTCGTCCCCCATCAGCCACTAAAGGCAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTTAAGCAATCTGCTTAATAACCTCAACACGGTCCCAAATCTTCTCCCTGTCAAGACAGGCCCTTCTCCTCAAAAACAGGTGTGTGATAATACTCGAGATGCAAAACGCAGCAGCACACAGTTATTTAGTTGTTCGCGCCAGACGTACAAACAAGAAGCGCCACGAACACACCCAACCCAAGGAGGAGGAACCGCCAACGATGACGACAAATCTCACGGTGCCTTCACCACCACGACCGGCGCAGACGACGAAGGACCAGAACATCAGTACGTCACAGCCATTCTAAGCCGTACCACTGGGGCCCACAAAAACGCCACGACGATACCCCACCTCCAGTTTCAGCGGTTCTCCCCCACCCACCCATTGGACCCTTCGGTTTTTCACCGTCTCGAGCACTACCCAACATCCAATTCCTTTGTTTCCTTCCCCAACGACAACAAAGATTGCGTCTTTGCGCGGAAACAGCATCTGGGTCCGCGCTGCAACCGTAGATTACTGTTTGATTTGGTCGACGAGTTGCTGTCGGAGATTCTGGGGAGGCCGAAGCGTTACAAGGGTGGGTTGTTAGAGACGGTGTGGGAGAGGGTTCGGAGTTTCCCACGTGCGAAGTGCGAGGTTCTGGAGGACCTTGACGCCTTGATAGAGATGGAGGAGATGAAGGAAGACGAGGAAGGGGAAGGGTTGGTGGCGGAGATCGAGAGGAACATAGTGGAGACGTTGGTGCATGAAACGTTTACCGTCATGGTTGGCGGCCTGAATACGTAG 2028 0.4645 MGKEWNWGGRSSKRSGAAETEIPSGCMCAVFQAFDFHPFHFSVNQQQSSFKSASSRTQEDHTVPKGAEAQRNSLESEDGTASSISKEENLKIRKNIRIKISGSTRSRTGSFSDLSSEISASPGTKTPTLVARLMGLDLLPDAHSSSSSCLSTPNQQGHRPRQHIKIIKHRNSTGSDTLPETPRMSSARRSDVEHRLSLQLNKENTVPYEDFEVPRLSFSKRKYYDENNSRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREQGREEFVGQFKFKKHPKTSVNESSPGKHSNPSYSPRLSRFIDSKHNKPSTTPSSTTPKNQNTHSVLKPPSPPPVFNIETQLSRVSTRPMPQALPEKELRNKKPVTKCKKTTPGKLSSRVNKPPQTSIRNKQEESFIIRPPSATKGNDIKTKSKRTHPLLSNLLNNLNTVPNLLPVKTGPSPQKQVCDNTRDAKRSSTQLFSCSRQTYKQEAPRTHPTQGGGTANDDDKSHGAFTTTTGADDEGPEHQYVTAILSRTTGAHKNATTIPHLQFQRFSPTHPLDPSVFHRLEHYPTSNSFVSFPNDNKDCVFARKQHLGPRCNRRLLFDLVDELLSEILGRPKRYKGGLLETVWERVRSFPRAKCEVLEDLDALIEMEEMKEDEEGEGLVAEIERNIVETLVHETFTVMVGGLNT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0725 675 MobiDBLite consensus disorder prediction 142 159 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 285 328 - -
Ssu7g0725 675 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 674 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 269 339 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 433 508 - -
Ssu7g0725 675 Pfam DUF761-associated sequence motif 115 145 IPR032795 -
Ssu7g0725 675 PANTHER DUF4378 DOMAIN PROTEIN 1 674 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 433 499 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 269 284 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 373 392 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 103 125 - -
Ssu7g0725 675 Pfam Domain of unknown function (DUF4378) 508 664 IPR025486 -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 142 193 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 368 392 - -
Ssu7g0725 675 MobiDBLite consensus disorder prediction 50 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0725 98 667 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.290 1.04e-52 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0725 - - gmx:102659931 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0725 7 14621840 14625591 Ssu7g0725 7 14621840 14625591 ECH
Ssu7g0725 7 14621840 14625591 Ssu7g0725 7 14621840 14625591 PCT