Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0714 atgaatggaATTTTGCAGATCGCAGTGAAGCGCTTGAAGACTATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAAGTGGAAGTACTAGGAAGGGTGAGGCATAAGAATTTGTTGGGCTTGCGTGGATTCTATGCAGGAGGCGATGAAAGATTGATTGTCTATGATTACATGCCTAATCACAGCTTGCTTACCCATTTGCATGGTCAACTTGCTTCGGATTGTTTGCTAGATTGGCCTAAAAGAATGAGCATAGCAATTGGAGCAGCTGAAGGCTTAGCGTATTTGCACCATGAGGCGAATCCTCACATCATTCATAGAGACATAAAGGCGAGCAATGTTCTTTTAGACCCCGAATTTCAAGCCAAGGTTGCTGATTTTGGTTTTGCTAAGTTGATACCAGAAGGTGTAAGCCATCTCACGACAAGGGTTAAAGGCACCCTCGGATATTTGGCGCCAGAGTACGCCATGTGGGGGAAGGTTTCTGAGAGCTGTGATGTTTACAGTTTTGGGATTCTGCTTTTGGAGATTGCCAGCGCCAAGAAACCAATTGAGAAACTCCCTGGCGGAGTGAAAAGGGATATAGTTCAATGGGTCACACCACATGTCCAAAAGGTTAACTTTAATCATATCGCTGATCCAAAACTGAAGGgccattttgatttagagcaaTTGAAATCTGTGATCATGATAGCTATGAGGTGCACAGATAGTAGCCCAGAGAAGAGGCCCAGCATGGCAGAGGTAGTGGAGTGGCTCAAGGGTGGCGtagggaagagaagaaaagagattcCAAATTTGAGTTACAAGACTGGAGACGACAAATATGAGGAAAATCATGGAGAGATTAGAAAAATGCAGTCCAAGTTGATACAACCAAGCCCACAAAGTCCTCCCTCACGTGATCCCACCCCTATTATAGACCTCaccatcaaccaatcaaaacCCACCTGGGCCCGGGTCTACGTACTCCGCGAAGCACTGGATAATTCCCACCTCAAGCTACCCCTCATTGTTTTTTTCCACGGTGGAGGGTTCGTGTCCTTCGGTGCCGCCTCACCTGTGGTCCACGATTTTTGCTTCAACATGGCGAACGACACTCAATCCATCCTCGTTTCAGTCAACTACCGCCTCGCCCCGGAGTACCGGCTACCGGCGGCGTACGAGGACGCCGTGGAAGCGTTGCACTGGATCAAAACCACCGACAATGCCTGGATGACGTGGCACGTTGATTACTCCCGATGTTTTCTAATGGGAGAAAGCGCTGGTGGAAATATTGCCTACAACGCGGGTCTACGTGCAGCTGCGGAGGTTGATCGAATCAAAGTGAGGACCCCATCGGAGTTGAGGCTCGCCAATAATTTGGCTTTGCCTCTGTTTGTCACTGATCTGATGTGGCAGCTGTCGCTGTCCCTAGGCGCTGACCGTGATCACGAGTATTCCAATCCAACGGTTAATGGTGGGTCCCCGGTTTTGGATCAGATGAGAGTGCTTGGATGGAGCGTGGTGGTGTTTGGGTGTGATGGGGACATACTGGGGGACGATCAGGTGGGGTTCGTGAAGTTGCTGGAGGACAAGGGTGTGCATGTGGTGGTGGGCCAGTTCTTCAGTGGAGGGTGGCATGGGATTTTTGTCGGTGACCCTTCCATGGCCAACAAATTGTATCATctacttaaaattcaaatgagTGGTTTATAA 1698 0.4682 MNGILQIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLTHLHGQLASDCLLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDPEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIASAKKPIEKLPGGVKRDIVQWVTPHVQKVNFNHIADPKLKGHFDLEQLKSVIMIAMRCTDSSPEKRPSMAEVVEWLKGGVGKRRKEIPNLSYKTGDDKYEENHGEIRKMQSKLIQPSPQSPPSRDPTPIIDLTINQSKPTWARVYVLREALDNSHLKLPLIVFFHGGGFVSFGAASPVVHDFCFNMANDTQSILVSVNYRLAPEYRLPAAYEDAVEALHWIKTTDNAWMTWHVDYSRCFLMGESAGGNIAYNAGLRAAAEVDRIKVRTPSELRLANNLALPLFVTDLMWQLSLSLGADRDHEYSNPTVNGGSPVLDQMRVLGWSVVVFGCDGDILGDDQVGFVKLLEDKGVHVVVGQFFSGGWHGIFVGDPSMANKLYHLLKIQMSGL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0714 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 104 116 IPR008271 GO:0004672|GO:0006468
Ssu7g0714 565 Gene3D alpha/beta hydrolase 275 560 IPR029058 -
Ssu7g0714 565 SUPERFAMILY alpha/beta-Hydrolases 296 549 IPR029058 -
Ssu7g0714 565 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0714 565 Pfam Protein tyrosine and serine/threonine kinase 5 252 IPR001245 GO:0004672|GO:0006468
Ssu7g0714 565 SUPERFAMILY Protein kinase-like (PK-like) 6 259 IPR011009 -
Ssu7g0714 565 CDD STKc_IRAK 1 255 - -
Ssu7g0714 565 Pfam alpha/beta hydrolase fold 338 543 IPR013094 GO:0016787
Ssu7g0714 565 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Ssu7g0714 565 PANTHER OS01G0253100 PROTEIN 5 277 IPR045271 GO:0004714|GO:0006468
Ssu7g0714 565 SMART serkin_6 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0714 565 Gene3D Transferase(Phosphotransferase) domain 1 59 264 - -
Ssu7g0714 565 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0714 Ssu-Chr7 14430716 14435923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0714 7 286 Trihelix Transcription Factor Family AT1G70460 40.830 2.29e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Ssu7g0714 PK_Tyr_Ser-Thr 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0714 - - gmx:100817283 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0715 7 14441681 14442130 Ssu7g0714 7 14430716 14435923 PCT