Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0710 ATGTCATGTCCCAATCCCAATCAAAAAGAAGCCCAACAAATAAAGAAACGGTGTGGTGAGAAGTTCACACAAACATCACCCCAACCCCATCACAAAGGGGAGAAGAGGCGCCTTCATCCCCTGTTTCATCCTCTGCCTTTTCTTTCTCAATTCTTCCTCatacattcattcattcattcccAGCCCTTGCCCACAATTTCTCTCGCCATGCCATCTCGACAACTGTCCACGTCAGCACCACCTCCCAACCACCGCGTATTGACCCCGCTCTTAGCCCCCGTTTGctctttattccttttaattctTCTTTGCCTTCGGAAGCGTAAACGCACGACCCCATCCTCCGACTCGGACTCCAACCCCCCTCAGCCGTTCTCGTACCCCCTCCTCCGCCGCGCGACGAACTCGTTCTCGACGCGCCTCGGCCACGGCGGCTTCGGCCCGGTCTTCTCCGGCACCCTCGGCGGCGAGCCGGTGGCGGTGAAACTGATGGACTCGGCCTCCCTGCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCGTCTCGACTCCGCTCCCCTTTAGTGGTCCCCGCCGTCGGGTTCTCCTCGGACCCGAAACGCCGCCGTTTCCTCCTCGTCTACCACCTCATGCACAACGGCAACCTCCACGACGCGCTGCTGTGGCACAAGTCCCCCCACCTCGCCCCCTGGAAAAACCGCTTCTCCATAATCCTCGACGTCGCGAGAGCCGCCCACTACCTCCACTCCCTCGACCCCCCCGTCGTCCACGGCGACATCAAACCCAGCAACATCCTCCTCGACCACTCCTTCTCCGCCAAACTCGCCGACTTCGGCCTCGCCCGCTTAAAAACCACCGACGACAACGGAGAACCAAAACAGCGCGacgagaggaaaaaaaaggaagagtcCGAGAGCGACGCCGGGTCCGAATTGGAAACTCAGAGCGTCAACACGGAGCAATCCTTTGAAGGGAACAATGCCTCGGATTATGTAATGGATTGGATCGGGAAGGACGTGAAGGAGGAATGGGTTGGCTCCGCTGCGTCGAGTAGTGGAACGGAGAAGAAAAGTAGGAAGAAATTGGAATGGTGGGAGTCGATGGATGATGGTGGAGttttgaagaaggagaagaggaggCCAGCGAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTTGccagaaagaagaagaagaagaagaaaaagaagaagagaaaggggGATGCCGACGATGATGGATTGGATGTAGATGATGTAAATGTACACAAGAGAGAACGAAACCGGAGTAGGAACAGTCGTGATAGTGTAGATTCGTGGTTCAGCGGGGAGCTACGTAGGGCGCGATGGAATAGTTATGATTCTGGGGCTGGGAGTGGGGAGATAGTATCAAAGAGTGGTGGTGTGAGTAGTGCTCCGAGTATGAGAGGAACGGTTTTCTACGTTGCTCCTGAGTATGGTCACAACGGTGATGTGTCGGAGAAGTGCGATGTGTATAGCTTCGGGGTTTTGTTGCTTGTTATTGTTTCTGGGAGGCGGCCGCTTCAGGTGACTGGTTCGCCGATGTCGGAGTTTCAGCGTGCGAATCTCGTGTCTTGGGCGAGGCAGTGCGCGCGGAAAGGGAAGCTTCTGGAAGTGGTTGATGAGGGTGTTGAGGGGTTGGACAAAGAGCAGGCTAGCCTCTGCGTGACGGTCGCGCTCATCTGTTTGCTAAAGTCACCCGCGCGTCGTCCTTCCATGAAGGAGGTTGTGGGAATGCTTAGTGGGGAGGTGGAGCGACCTCGGTTGCCGGTTGAGTACTCGCAACAGTCGCACGCTCACTTCCCGTTCAAGTCTCGGAAAGAAGGCCGCTGA 1860 0.5301 MSCPNPNQKEAQQIKKRCGEKFTQTSPQPHHKGEKRRLHPLFHPLPFLSQFFLIHSFIHSQPLPTISLAMPSRQLSTSAPPPNHRVLTPLLAPVCSLFLLILLCLRKRKRTTPSSDSDSNPPQPFSYPLLRRATNSFSTRLGHGGFGPVFSGTLGGEPVAVKLMDSASLQGEREFHNELFFASRLRSPLVVPAVGFSSDPKRRRFLLVYHLMHNGNLHDALLWHKSPHLAPWKNRFSIILDVARAAHYLHSLDPPVVHGDIKPSNILLDHSFSAKLADFGLARLKTTDDNGEPKQRDERKKKEESESDAGSELETQSVNTEQSFEGNNASDYVMDWIGKDVKEEWVGSAASSSGTEKKSRKKLEWWESMDDGGVLKKEKRRPAREWWKEEYSQELARKKKKKKKKKKRKGDADDDGLDVDDVNVHKRERNRSRNSRDSVDSWFSGELRRARWNSYDSGAGSGEIVSKSGGVSSAPSMRGTVFYVAPEYGHNGDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPMSEFQRANLVSWARQCARKGKLLEVVDEGVEGLDKEQASLCVTVALICLLKSPARRPSMKEVVGMLSGEVERPRLPVEYSQQSHAHFPFKSRKEGR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0710 619 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 70 618 - -
Ssu7g0710 619 MobiDBLite consensus disorder prediction 311 325 - -
Ssu7g0710 619 Gene3D Transferase(Phosphotransferase) domain 1 120 308 - -
Ssu7g0710 619 MobiDBLite consensus disorder prediction 285 309 - -
Ssu7g0710 619 SUPERFAMILY Protein kinase-like (PK-like) 119 602 IPR011009 -
Ssu7g0710 619 MobiDBLite consensus disorder prediction 1 35 - -
Ssu7g0710 619 MobiDBLite consensus disorder prediction 285 325 - -
Ssu7g0710 619 ProSiteProfiles Protein kinase domain profile. 135 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0710 619 SMART serkin_6 135 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0710 619 MobiDBLite consensus disorder prediction 397 419 - -
Ssu7g0710 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Ssu7g0710 619 PANTHER OS07G0586332 PROTEIN 70 618 IPR044576 -
Ssu7g0710 619 MobiDBLite consensus disorder prediction 1 26 - -
Ssu7g0710 619 Coils Coil 388 408 - -
Ssu7g0710 619 Pfam Protein tyrosine and serine/threonine kinase 137 295 IPR001245 GO:0004672|GO:0006468
Ssu7g0710 619 Pfam Protein tyrosine and serine/threonine kinase 476 587 IPR001245 GO:0004672|GO:0006468
Ssu7g0710 619 Gene3D Transferase(Phosphotransferase) domain 1 457 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0710 Ssu-Chr7 14323937 14325796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0710 452 586 Receptor kinase-like Gene Family AT3G58690 32.624 1.01e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Ssu7g0710 PK_Tyr_Ser-Thr 5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0710 - - gmx:100817816 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0710 7 14323937 14325796 Ssu7g0710 7 14323937 14325796 ECH
Ssu7g0710 7 14323937 14325796 Ssu7g0710 7 14323937 14325796 PCT