LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu7g0704	atgaagttCACTGATTTTCTCTTTGCACTGGGACCGCTCTTTGCAACAGTAATAGCTGTTATCTTAGCTGCTATTATTACCAAAATCCATGGCAGTAGATTTTttgacaagaaaagaaaataccaCCCTGTTGCTGGCACGGTCATACACCAATTGTTCAACTTTCATAGGCTGCTCGAGTACATGGTCGACCTTACAAAGCAGAGGAAAACTTACATGTTGCTCAGCTTCGTCAGAAATGAGGTGTACACTGCAAACCCTGTTAATGTTGAGCATATCCTCGTCACAAACTTCGCAAACTACGGCAAGGGTTGGTATCACCATAGTGTCTTGTCAGATTTTCTAGGAGATAGTATATTCGCGGTGGATGGAGAGCAGTGGCGACATCAGAGAAAGGCAGCAAGCTATCAATTCTCAACGAAAATGTTGAGAGACTTCAGCAGTTCAGCTTTCAAATCCAATGCAGTAAAACTTGCGGGGATAGTGTCTGAAGCTGCAATCTCAAACAAAGTTATTGAGATACAGGATTTGTTCATGAAAGCAACTCTAGATTCTGTATGCAAGGTTATCCTTGGTGTTGAACTGGACACTCTGGGTGGAACCTATAAAGAAGGCACAGAATTCTCCAATGCTTTTGATGAAACAAGTGCTGCTATCATGTATCGGTATTTTAACTTTCTCTGGAAGATTATGCGGTTCATGAACATTGGATCAGAAGCAGTACTTAGGAACAGTTTAAGAGTGATTGATGCATTCGTGTATAAACTAATCAGAAGCAAAATTGAGCAGACCCAAAAGCTACAAGATAATTCTCCTGTGATGAAAGGAGACATTTTGTCAAGGTTTATAGAATTGAAAGAAACTGATCCAAAGTACCTTAGAGACATTTCCTTGAGTTTTATCCTTGCAGGGAAAGATACAACAGCAATTACTCTTTCCTGGTTCCTTTACCAACTCTGCAAGCATCCTCATGTGCAGGAGAAGATTGCACAAGAAATTAGAGAGGCAACAAATGTAGCAGCTGGATCAACCATTGATGAACTTGTAGCCAGAGTAACTGAAGAGAACCTGGAAAAGATGCAGTACCTACATGCAGCATTGAATGAAACACTCAGACTCCACCCAGCAGTTCCAGTGGAAGGTAAGTATTGTTTTTCAGATGACACGTGGCCAGATGGGTATAGTGTCAGGAAAGGTGATCTTGTGTCATTCCAACCATATGTCATGGGAAGGATGAAATTCTTGTGGGGTGATGATGCTGAGAAATTCAGGCCAGAGAGAtggcttgatgaaaatggaagtTTGCAGAAAGAAAGCCCTTTTAAGTTCACAGCCTTCCAGGCGGGTCCAAGAATTTGCCTGGGGAAGGAGTTTGCATACAGACAAATGAAGATATATTCTACAGTCCTCGTAGGTAGCCACAACTTCAAACTGGCAGACCAAAAGAAATCAGTAAAATACAAAACCATGCTTACTCTACAAATTGATGGTGGCCTGCACGTGTATGCttttaagagagagaaataa	1527	0.3995	MKFTDFLFALGPLFATVIAVILAAIITKIHGSRFFDKKRKYHPVAGTVIHQLFNFHRLLEYMVDLTKQRKTYMLLSFVRNEVYTANPVNVEHILVTNFANYGKGWYHHSVLSDFLGDSIFAVDGEQWRHQRKAASYQFSTKMLRDFSSSAFKSNAVKLAGIVSEAAISNKVIEIQDLFMKATLDSVCKVILGVELDTLGGTYKEGTEFSNAFDETSAAIMYRYFNFLWKIMRFMNIGSEAVLRNSLRVIDAFVYKLIRSKIEQTQKLQDNSPVMKGDILSRFIELKETDPKYLRDISLSFILAGKDTTAITLSWFLYQLCKHPHVQEKIAQEIREATNVAAGSTIDELVARVTEENLEKMQYLHAALNETLRLHPAVPVEGKYCFSDDTWPDGYSVRKGDLVSFQPYVMGRMKFLWGDDAEKFRPERWLDENGSLQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSTVLVGSHNFKLADQKKSVKYKTMLTLQIDGGLHVYAFKREK	508

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ssu7g0704	508	Pfam	Cytochrome P450	55	493	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	E-class P450 group I signature	443	453	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	E-class P450 group I signature	292	309	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	E-class P450 group I signature	364	382	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	E-class P450 group I signature	453	476	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	E-class P450 group I signature	312	338	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PANTHER	CYTOCHROME P450	12	506	-	-
Ssu7g0704	508	PRINTS	P450 superfamily signature	453	464	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	P450 superfamily signature	303	320	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ssu7g0704	508	PRINTS	P450 superfamily signature	365	376	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu7g0704	Ssu-Chr7	14259269	14261601	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu7g0704	5	506	Cytochrome P450	AT2G45510	50.685	1.00e-171	492

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu7g0704	-		-	pvu:PHAVU_007G063800g	857.825

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ssu7g0704	7	14259269	14261601	Ssu7g0704	7	14259269	14261601	ECH
	Ssu7g0704	7	14259269	14261601	Ssu7g0704	7	14259269	14261601	PCT

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