Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0697 ATGGCCACCAAAAACGAAAGCGAGAATTCAACCGATACTTCTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGCGGCAACGGTTTTTGCTTGAATTGGAGTTTCTTCAGTGCCTTGCCAATCCTACCTACATCCACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAACGCCctgaatatattaaatttattatGTATCCTCATTGCCTCTATTTTCTTGAGCTACTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACCAATAAGgaACTGGCACATAGACAGCAATTCTACTTCTGGAAGAACTATAGGAACAATAggctaaaacacattttaccaaGATCACTTCCTGAACCCAGTGCCACACCTGCACTTCCTGCTTCTGCCTCAACTCCAGCTCAGGCACTTGTGTCTGCACTACCACCAGTACCCGCTACAAGTGTTGCTGTGACAGCAACACCTACTCAAGCTCCTTCTCCTATGCCATATGGTATGCCCCCTGGCTCTGCTCTTGCAAAAAATGACATGAGGAATCCTACAGTTGATAGAAGGAAGAGAAAGTGA 621 0.4122 MATKNESENSTDTSPSSPKNIYKDPDDGRQRFLLELEFLQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATPALPASASTPAQALVSALPPVPATSVAVTATPTQAPSPMPYGMPPGSALAKNDMRNPTVDRRKRK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0697 206 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Ssu7g0697 206 MobiDBLite consensus disorder prediction 1 20 - -
Ssu7g0697 206 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 9 206 - -
Ssu7g0697 206 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 9 206 IPR008831 GO:0003712|GO:0006355|GO:0016592
Ssu7g0697 206 MobiDBLite consensus disorder prediction 1 23 - -
Ssu7g0697 206 MobiDBLite consensus disorder prediction 169 206 - -
Ssu7g0697 206 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Ssu7g0697 Med31 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0697 K15153 - gmx:100527879 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0697 7 14086369 14088644 Ssu7g0697 7 14086369 14088644 ECH