Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0695 ATGCCAGTGAGGCAGATGAAAGAAAGCTCCGAGCAACACCTTGTGATCAAACCCCATTTGCAGAATCCTATGAATCCAGCCAAGAAGACAACCAAAGCTGCCCAAAATGGCAAAGGTCCACCGCCACAAGAAAACCATAAACAAACTTTGCCTCAATCAAAGAACAAGGGAAGAAGAAAGGGGAGAGGTGGCAGAAAACCAGATCAAGGAGATGTTATGATGAGGCCTAGTTGCGGGCCGTGCACTGTAACACTAACAAGTAGTGCAAATGGGAATGTTGAAAATGGTTGCATCTCTGATATGGGTTTTCCCACTTCAAGCAAGTCTTTGAGCTTTGCTCGTAGACCTGGGTATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTTACTATTACCCCAGAAGTGTCTTCAAGAACAGTAAACAGGTCCATCATAGCAGAACTCGTGAGGCTGTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTACACAGCAGGGCAGCTTCCCTTTGCTTGGAGAGAGTTTAAGATTAAGCTTGTAGATGAAGAGGCTGGAGTTAATGGCCCCAAAAGGGAAAGAGAGTACAGGGTGGTGATCAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAACGTGCTGATGCACCACAAGAGGCACTTCAAATTCTTGACATTGTACTAAGAGAGCTGTCAACTAAGAGGTATTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGTTTAGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACACAAATGGGCCTTTCCCTCAATATTGATATGGCATCTGCTGCGTTTATTGAGCCTCTTCCAGTAGTGGAATTTGTTGGGCAGCTATTAGGGAAAGATGTGCTGTCAAGGCCATTGTCTGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTGAGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTAGTGTTTCCTGTTGATGAGAACTCAACTATGAAATCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAGGCTAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATTACTGCCCTATTGAAAGTTACTTGCCAGAGACCTCGTGATCGAGAAAATGACATTTTACggCAGACCATTCAACATAATGCTTACGATCAAGATCCTTATGCAAAGGAATTTGGAATTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGTTTACCCCAAATTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTTGCCGGTGGGCATGCATAAATTTTTCACGGAGCGTGCAAGATAGTGTTGCTCGCACTTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAGCCTGAACAGGTGGAGAAAGCTTTGAAACATGTTTACCATGTGTCAGCGAGCAAAACTAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCAGACAATAATGGATCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGCTTAATTTCACAATGCTGTCTGACGAAGCATGTCTTCAAAATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGATCAATGTGAAGATGGGAGGTAGAAACACTGTACTTCTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGTGACATACCAACCATAATTTTCGGAGCAGATGTAACCCACCCTGAAAATGGAGAAGACTCGAGCCCCTCAATAGCAGCTGTAGTAGCATCCCAGGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGCGCGCAAGCTCATAGGCAGGAACTTATACAAGATTTGTACAAAACTTGGCATGACCCTGTTCGTGGCACAGTTAGTGGTGGCATGATACGAGATTTACTGGTTTCCTTTAGAAAGGCAACGGGACAAAAGCCACTACGAATTATATTTTACAGGGACGGTGTAAGTGAAGGGCAATTTTACCAAGTTTTACTTTATGAGTTGGATGCGATTCGGAAGGCATGTGCTTCCTTAGAACCAAACTACCAGCCTCCAGTAACTTTCATAGTTGTGCAAAAAAGGCATCATACTCGGTTATTTGCAAACAACTACAGGGATAGAAGCAGTACAGATAGGAGTGGGAATATATTGCCTGGGACTGTTGTTGATTCCAAAATCTGCCATCCAacagaatttgatttttatctctGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACAAACAACCTTTGTTATACATATGCCAGGTGTACGCGCTCGGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCCTTTCGAGCCCGTTTCTATATGGAACCAGATATGCAAGAGAATGGCTCTACAGGTGATGATAATGGTCATAGTTCCAAAGGAACGCGAGGAGCTGGAGATTATAGTGTCAAGCCATTGCcagacttgaaagaaaatgtGAAGAGAGTAATGTTTTACTGTTAG 2928 0.4218 MPVRQMKESSEQHLVIKPHLQNPMNPAKKTTKAAQNGKGPPPQENHKQTLPQSKNKGRRKGRGGRKPDQGDVMMRPSCGPCTVTLTSSANGNVENGCISDMGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDEEAGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRQTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQIGQWNMMNKKMINGMTVCRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSASKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGDDNGHSSKGTRGAGDYSVKPLPDLKENVKRVMFYC 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0695 975 MobiDBLite consensus disorder prediction 24 50 - -
Ssu7g0695 975 MobiDBLite consensus disorder prediction 934 958 - -
Ssu7g0695 975 SMART PAZ_2_a_3 324 456 IPR003100 GO:0005515
Ssu7g0695 975 ProSiteProfiles Piwi domain profile. 609 930 IPR003165 GO:0003676
Ssu7g0695 975 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 974 - -
Ssu7g0695 975 MobiDBLite consensus disorder prediction 1 75 - -
Ssu7g0695 975 Pfam PAZ domain 346 450 IPR003100 GO:0005515
Ssu7g0695 975 Gene3D - 499 672 - -
Ssu7g0695 975 CDD PAZ_argonaute_like 319 433 - -
Ssu7g0695 975 SMART DUF1785_2 267 319 IPR014811 -
Ssu7g0695 975 Pfam Argonaute linker 2 domain 460 507 IPR032472 -
Ssu7g0695 975 CDD Piwi_ago-like 479 929 IPR045246 -
Ssu7g0695 975 Pfam N-terminal domain of argonaute 124 258 IPR032474 -
Ssu7g0695 975 Pfam Mid domain of argonaute 518 595 IPR032473 -
Ssu7g0695 975 PANTHER PROTEIN ARGONAUTE 10 55 974 - -
Ssu7g0695 975 SMART Piwi_a_2 609 930 IPR003165 GO:0003676
Ssu7g0695 975 Pfam Argonaute linker 1 domain 268 317 IPR014811 -
Ssu7g0695 975 SUPERFAMILY Ribonuclease H-like 601 931 IPR012337 -
Ssu7g0695 975 Pfam Piwi domain 610 929 IPR003165 GO:0003676
Ssu7g0695 975 Gene3D - 678 975 IPR036397 GO:0003676
Ssu7g0695 975 SUPERFAMILY PAZ domain 314 467 IPR036085 GO:0005515
Ssu7g0695 975 Gene3D paz domain 313 438 - -
Ssu7g0695 975 ProSiteProfiles PAZ domain profile. 320 434 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0695 Ssu-Chr7 14026205 14033446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0695 1 975 Eukaryotic Initiation Factors Gene Family AT5G43810 81.964 0.0 1654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0695 K11593 - gmx:100816999 1909.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2998 2 91562513 91563761 Ssu7g0695 7 14026205 14033446 PCT