Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0694 ATGCAGCTTCTTCACTCGGACGAACCCGCGCTCGAGCGCCGCGACTCCCCGGAGAAACCCGAGGACCCGAACGCCGCGTCCGATTCTCTCGACTCCGGAACCGACGACGGCGCGGCTCTCGACGTGACCGGAAAGAGCGTCGAGTTTCCGGCGGCGGAGAACGCCGAGGACTCCTTGGAGAGCCTTTACATGTACAAGAACGTGTACAGTCTGATTCCGAAGTCGGTTTCGCGCCTCGCGCGGTTGCGAACGCTGAAGTTCTTCGGAAACGAAATTAACCTGTTCGCGCCGGAGTTCGGGAACTTGACAGCGTTGGAGTGCTTGCAGATGAAGATTTCCTCGCCGGGGATTGGAGGCTTGCCGTTGCACACGCTCAAGGGTTTGAAGGAGCTCGAGCTCTCCAAAGGCCCTCCCAGACCTTCGGCTTTTCCGATTTTGACCGAGATTTCAGGTCTCAAGTGCTTGACTAAGCTTTCCATTTGTCATTTCTCTATACGATACCTTCCTCCGGAAATTGGATGCTTAAAGAACTTGGAGTATCTTGATCTTTCGTTCAATAAAATGAAGACGTTGCCGGAGGAGATTAGTTATTTGGATGGCTTGATATCGATGAAAGTTGCAAATAATAAGTTGGTGGAACTGCCATCAGCAATGTCTTCTCTGTCAAGGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCTTTAGGGTCCCTTGAACTTGCCTCGATGCATAGACTTCAGAAGTTAAATCTTCAGCATTTTACATGGAGAGACCGCATTGAAGGTGCCTCTGTGCATCCAAGAACAGtaaatgacaatgtaattgATAATGTTAACAATGATGAAGTAATTATTGAAAAGCACTTTTCTCGGGAAGATTGCTGCACTACTGAAAGCAAAGATGAAAAAGATGCATCCTTATGCTCCTTAGAGAACAGGCAAAGTGAACAGGATGAAGCATCTTGCTCAGAACTTTTGAAGTGTGTTTCTAAATCAAAGAGACATTTAGATCAGGATCTTGATAATCCTAAACCATTCAAGTCTAGAAAATCAATTAGTGCTTCATTATTGTCTTGCAAGTACAGCAAGATCTCATTTTGTGGCATTGAAGACCATCTATCAGATGGATTTTATGATGCAGGACGAGATCGGTCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTTTTAGACAGAAAAAGGGATGAAGAGTTGGATGCTGTTATGCTAGCTGCTCAGGCATTGGTCTCTAATTTGAAGCAGTTAAATGGTTTAAACAGACCTGGGAACCAGGCTGTGTTGGATAACTTGCAGACGGCATCACTGCTTGCACTCTTTGTGTCAGATCATTTTGGTGGCAGTGATAGAGGTGCTATTGTAGAAAGAACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCAGCTGGAAGCAGCACCAGTATAAGCGCTTCCACCAAACCAGTTGTAAACACCATAGAAGATGTCACGCTTTCTAAGATGTCTGAAAAATCTCTTGACTCTATAAAAAAAAGGCGAAATTCAATCATAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCGCCAGTTCCCTGTGAGCTTGTCAGGGGTTACCTGGATTTTTCACCACATGCCTGGAATATCATTCTGATTAAGAAGGGTGCAACGTGGGTTCGAATGCTGATTGATGCTTGTCGACCTCATGatataagagaagagaaagatcCTGAATACTTTTCCAGGTACATACCTCTTAATCGAACCACAATCCCTCTTTCATCTGGAGGAAGTCCAGGTCCTGATTATTCTTTTCCATCTCTCACTACTTGTGATGAACTCAAGACAAAAGCTTCGACTACTTTAGTTAAATGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGAGCAGGGGAGTTCGgcagacaaaattaaaaattttgaatataattgttTGGGAGAAATTAGAATTCTTGATTCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCAAATATCATGTCAATGGTCTATCTCAGCTGATGGTAATCCTGAGCACCGAGTATTAAGATCTGCAATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAAACTATCTGGAGAAGCTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTGGCTTTGTATATAGCCAAAGATGTCTCATGTGCTTTGTCAGAGCTGCACTCAAGGCACATAATTCATCGTgacataaaaagtgaaaacattcTGTTTGATTTTGACAGGAAGAGAGATGATGGAACTCCCACCGTAAAGCTCTGTGATTTTGACAGTGCAGTGCCACTAAGATCAACTTTACATGCATGTTGTATTGCTCATGTGGGAACACCTCCTCCTTGTGTATGTGTTGGAACCCCTCGGTGGATGGCTCCAGAGGTTATGCAGACcatgtataaaaaaaactcttatgGATTGGAAGCTGACATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACTCTGCAAATTCCATATTCTGGACTTCCTGATTCACACTTCCTTGATAGTCTGCAGATGGGTAAACGACCACAATTAACTGATGAGCTGGAGGTATTGAGTTCAATGAATGAACCCACAATGATTCCATCTGGTGAAGAGCTGGCAAAATCAGATGTTGAGGTAGACATGTTGAAATTCCTTGTTGATTTGTTCCATAGGTGCGTGGAAGAAAATCCAAACAAACGTCCTACAGCTGAAGAAATCCATAAAATGCTGCTTACACACACTGGTCGCTTACAAGTTTAA 2913 0.424 MQLLHSDEPALERRDSPEKPEDPNAASDSLDSGTDDGAALDVTGKSVEFPAAENAEDSLESLYMYKNVYSLIPKSVSRLARLRTLKFFGNEINLFAPEFGNLTALECLQMKISSPGIGGLPLHTLKGLKELELSKGPPRPSAFPILTEISGLKCLTKLSICHFSIRYLPPEIGCLKNLEYLDLSFNKMKTLPEEISYLDGLISMKVANNKLVELPSAMSSLSRLESLDLSNNRLTSLGSLELASMHRLQKLNLQHFTWRDRIEGASVHPRTVNDNVIDNVNNDEVIIEKHFSREDCCTTESKDEKDASLCSLENRQSEQDEASCSELLKCVSKSKRHLDQDLDNPKPFKSRKSISASLLSCKYSKISFCGIEDHLSDGFYDAGRDRSFMPLESYEQNQCLASREVILLDRKRDEELDAVMLAAQALVSNLKQLNGLNRPGNQAVLDNLQTASLLALFVSDHFGGSDRGAIVERTRKSVSGSNYNKPFVCTCSAGSSTSISASTKPVVNTIEDVTLSKMSEKSLDSIKKRRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNIILIKKGATWVRMLIDACRPHDIREEKDPEYFSRYIPLNRTTIPLSSGGSPGPDYSFPSLTTCDELKTKASTTLVKCKFGSVEAAAKVRTLEEQGSSADKIKNFEYNCLGEIRILDSLKHPCIVEMYGHQISCQWSISADGNPEHRVLRSAIFMEYVEGGSLKNYLEKLSEAGEKHVPVELALYIAKDVSCALSELHSRHIIHRDIKSENILFDFDRKRDDGTPTVKLCDFDSAVPLRSTLHACCIAHVGTPPPCVCVGTPRWMAPEVMQTMYKKNSYGLEADIWSFGCLLLEMLTLQIPYSGLPDSHFLDSLQMGKRPQLTDELEVLSSMNEPTMIPSGEELAKSDVEVDMLKFLVDLFHRCVEENPNKRPTAEEIHKMLLTHTGRLQV 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0694 970 ProSiteProfiles Protein kinase domain profile. 648 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0694 970 SMART LRR_sd22_2 175 200 - -
Ssu7g0694 970 SMART LRR_sd22_2 221 242 - -
Ssu7g0694 970 SMART LRR_typ_2 79 101 IPR003591 -
Ssu7g0694 970 SMART LRR_typ_2 221 244 IPR003591 -
Ssu7g0694 970 SMART LRR_typ_2 175 198 IPR003591 -
Ssu7g0694 970 MobiDBLite consensus disorder prediction 1 25 - -
Ssu7g0694 970 SUPERFAMILY RNI-like 58 259 - -
Ssu7g0694 970 Gene3D Transferase(Phosphotransferase) domain 1 743 968 - -
Ssu7g0694 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Ssu7g0694 970 SUPERFAMILY Protein kinase-like (PK-like) 655 961 IPR011009 -
Ssu7g0694 970 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Ssu7g0694 970 Gene3D Ribonuclease Inhibitor 44 281 IPR032675 -
Ssu7g0694 970 SUPERFAMILY Cysteine proteinases 541 599 IPR038765 -
Ssu7g0694 970 SMART LRR_bac_2 221 240 - -
Ssu7g0694 970 SMART LRR_bac_2 175 194 - -
Ssu7g0694 970 SMART LRR_bac_2 198 217 - -
Ssu7g0694 970 Gene3D Phosphorylase Kinase; domain 1 648 742 - -
Ssu7g0694 970 PANTHER BNAC08G43810D PROTEIN 318 965 - -
Ssu7g0694 970 PRINTS Leucine-rich repeat signature 221 234 - -
Ssu7g0694 970 PRINTS Leucine-rich repeat signature 178 191 - -
Ssu7g0694 970 Pfam Ethylene-responsive protein kinase Le-CTR1 512 586 - -
Ssu7g0694 970 SMART serkin_6 640 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0694 970 Pfam Protein kinase domain 679 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0694 970 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 60 257 - -
Ssu7g0694 970 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 318 965 - -
Ssu7g0694 970 PANTHER BNAC08G43810D PROTEIN 60 257 - -
Ssu7g0694 970 Pfam Leucine Rich repeats (2 copies) 223 256 IPR025875 -
Ssu7g0694 970 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Ssu7g0694 970 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0694 Ssu-Chr7 13993010 14000319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0694 668 961 MAP Kinase Kinase Kinase AT2G24360 27.551 1.03e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Ssu7g0694 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0694 - - gmx:100811118 1272.3