Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0690 ATGGAGGAAGAGAGTGAGTGTTTCGAGTGCCTCCAACTTCGAATAAAGTCGGATTTCTCCGACCAAGTCTTCTTCAATTACGCCATCTCCACTTCTGCTTTTCCTTTCGGATCCTCAGCTATCGTCCAtATTTCTGGTACGGCTGATGGTGAAGCTTCGGGCGGTCAATTTATGTTGCAGTACATGCCGTGTCGTGAGAAGAATTGTTTTATCAACTATGTaaatgaatatattttggATAGTGGTGAAAGCAGTACTAGGGGTAGTGATCCTGATATTGGAAGCAGTGAAGATAATGATGTTGTTAATGGTAGGATTACTTCATCAGATGATTCTGACACTGGAAAAGCTTTTTCTGGAAACACGACTTGTAGTCATGCTGGAAGGTTTTCTTGCTCAAGGACAATCACTTCACTTGCACCGCTTGCTCGTGTGGGAATGTCTTCCTATTCCACATTTCAAGAGGTCTCCACTGAATTCTTGTCTGGGTTAATTGAAGATCACGTGTTAGATTCACTTGATCACTTCATTGAAGGGAAAGCGTCTGGACGGGACAGTGTAAACTTCCTTAGTTTAATTGGGTTGCCATCATTTGAGGAGGATACTTTTCCAGGCTCTTTGAGGCATCCAAACATAGCTCCTGTCCTTGCGATTTTTAAAACATCCGATCACATTAATGTGGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAATAGAAGATTTCTTATGTATCAGCTACTCTCAGCCTTGTCGTACATACATGGTTTAGGGGTTTCCCATGGTAATATATGCCCATCCAATATCATGTTGATTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTGTATTGGAATCTAATTTAACTTTAAAGGAGAGTGAAAGTGTTAATTCTGAACTTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCATTCTTATGGCCTTTATGCTGATCTAAAGCTTTCTCCAACAATGGATTGGCATTCTTGCTTCCATCAGTGGTGGAAAGGAGAACTaagtaattttgaatatttactCATCTTAAACAAATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGACTTTAGCTCAAAACCTGATGATAATTGTGATGCAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAATTGGATTTCACTTATTCAACGTCTGAAATCCCACATCATGTTTCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGACTTCCTTTGAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCTGATGAATGCATTCCAGAGTTTTACTTTGATACCCAAATTTTTAAGTCAATACATGATGGAATGGCCAATTTGTCTGTACCCTCTTGGGCAGAGAGTCCCGAGGATTTCATTAAATTGCATCGTGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTGCATCATTGGATAGATATAACCTTTGGCTACAAAATGTCTGGCCAGGCATCTGTTGCTGCTAAGAATGTTATGCTTCCTCTATCAGAACCCATGATGCCAAGATCAACAGGACGGCGTCAGCTCTTTACACAACCACATCCCATCCGTCATGCCACTACCAGAGCAAAGCAATATGGTTCCAATAAATATGCCAAAGTTTGGAGTCAAACAAATGAAATGCACCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAGCAAGCATCTACATTTTCTGAACATGCTAGGCATTTGAATGCCTGTTACCATTATCCCTTAAATCAAATGACAGGGAAGAACATTTCATCTTTGGGAGATCCAACAACAGAGACATTTAGTAAAAGTATAAGCAAACTATCTTTGATAGACAGAAATTACCAGGTGCCATATAAAATGaatctaatttcttttcttcaacATATGAAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGCTACTTTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCCGAAGATGTTGCTAGGGACATATTTTCTATTGGTTGTCTTTTGGCTGAACTTCATCTTTGCAGGCCGCTCTTTGATCCAATTTCATTGGCAATATACTTGGAAGATGGAACCTTACCAGGATTTCTGCAGGATCTACCTCCTGATATTAAATTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCTGCCAAAATTCTTCTGGAATCACCTTATTTTCCAAAGACCGTCAAATCGTCCTACTTGTTTCTTGCTCCACTTCATCTTGTAGCTAAAGATGAAACTCGTCTTCGTTATGCTGCAAATCTTGCAAAGCATGGAGCTCTCAGGGAAATGGGCGCATTTGCAACTGAAATGTGCACTACTTATTGCCTACCACTTATAGTGAATGCTGTGAGTGATATCGAAGCTGAATGGGCATATATGCTACTGAAGGAATTCATGAAATGTTTAACAGCGCAAGCAGTGAAGATGTTAATCTTGCCAACCATACAGAAAATTTTACAGACCACAGGTTATTTACGTTTAAAGGTTTCCCTTCTACAAGACTCATTTGTACGGGAAGTATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATTCATCCGTTGGTCTTGTCAAACTTGTACATTGCTCCAGATAAAAGTTCAGCTTCCTCTGCTTCAGTGCTTCTAATCAGCTCTAGTGAGGAGCTTGGTGTACCTATTACCATCCATCagACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTACGTGCAGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATCGCCAAACAGATGGTACCGTTACTGAAAAATGTTGTTTGTTCTTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTACTGATTGCATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAGGTCATTGTAAAGGAGCTGCTTGAAGACCTAAGTTGCATATACATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGTTTGCTGCTACTACTCTTTTTGGAATTTGTCAGCGGATTGGAGCTGATTTGACAGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGgaaatttctaaaggttcaacTACtgttggcagaaacttgaaggttggcaaaataaaaattggaggGGACTTGCATATTGAAAGTCGTATGGATCTAGTGTCAGTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGATTATTGAACAATATCTTCTACGCTGTCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAACGGCTCAGAAAATATTATTGCTAGAAGACCCGTAATAGCCCGGGGATTTACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTgccaaaaatttgatccctcaGAGACGACCATTTAAAGTTCATCAAAGTCAAGTAGGAATGCATGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCAAACCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGATTCAGAAAGATGATCTTCCATGGAAGATCAGAGCATCTGTTATATACTCTATACGTGCCCATCATGGAGCAGTGAGGTCTCTGGCTGTTCAGGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAATGGGAATTGAGCCAAACTAATTGTCTGTCCGGTTATCATGGCCATGAGGagGTTGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTGGCATCTTGCGATGGAACAATTCACATTTGGAATAGTCAAACAGGGAAGCAAATATTAGTATTTGCTGAGTCCCAAACAGAATCTGGCCATCCTACAAGCCACCCATCCTCTGTATCAAAAATTAACAGTGACCAGGCTAATGTGCTTAATTTGAATACTCTATCAAATGGAATATTTTCTAGTGCTTTTGATTCAAGTCTTTATACTTGTATGCATCTATTATACTCCGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTGAGGTTTATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGCGAATCTACTGAATCTAGTTTTCCTTCACTTATTTCTGCCATTTGTTCCACTGGCTCTGACAAGATGCAAGCAGGTGGAATTTCCACTTTGCCATCTTTTATTGCAGCTGGACTAAGTTCTGGTCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCACGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTGCTCATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTGAGAATGAATTTGCCATCTCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTAATTTCAATTTCCCGGAATAGGATTGGGCTTCTCTCGTTGTCCAAATCTGCCAATGAAACAGATGGGCAGCATCACATTATCCCTCAGAAACTCTACGTTTCTGATAATGGAATGAGAGCTTGTCCGCGTTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACCGAAGATGGTTATCTGA 4962 0.3976 MEEESECFECLQLRIKSDFSDQVFFNYAISTSAFPFGSSAIVHISGTADGEASGGQFMLQYMPCREKNCFINYVNEYILDSGESSTRGSDPDIGSSEDNDVVNGRITSSDDSDTGKAFSGNTTCSHAGRFSCSRTITSLAPLARVGMSSYSTFQEVSTEFLSGLIEDHVLDSLDHFIEGKASGRDSVNFLSLIGLPSFEEDTFPGSLRHPNIAPVLAIFKTSDHINVVLPKTPYNLESILHFNPNALKSDWNRRFLMYQLLSALSYIHGLGVSHGNICPSNIMLIDSLWSWLRLWNEPVLESNLTLKESESVNSELARIGCCNVGCHSYGLYADLKLSPTMDWHSCFHQWWKGELSNFEYLLILNKLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYFDTQIFKSIHDGMANLSVPSWAESPEDFIKLHRDALESNRVSFQLHHWIDITFGYKMSGQASVAAKNVMLPLSEPMMPRSTGRRQLFTQPHPIRHATTRAKQYGSNKYAKVWSQTNEMHRETSLLSETAYLQELEQASTFSEHARHLNACYHYPLNQMTGKNISSLGDPTTETFSKSISKLSLIDRNYQVPYKMNLISFLQHMKEEDEGSSGYPDLLLWKQKLSSSRLCSEDVARDIFSIGCLLAELHLCRPLFDPISLAIYLEDGTLPGFLQDLPPDIKLLVEACIQKDWMRRPSAKILLESPYFPKTVKSSYLFLAPLHLVAKDETRLRYAANLAKHGALREMGAFATEMCTTYCLPLIVNAVSDIEAEWAYMLLKEFMKCLTAQAVKMLILPTIQKILQTTGYLRLKVSLLQDSFVREVWNRVGKQAYLETIHPLVLSNLYIAPDKSSASSASVLLISSSEELGVPITIHQTILPLVHCFGKGLRADGIDVLVRIGGIFGELFIAKQMVPLLKNVVCSFIDVSCMNKPDPVQSWSALALTDCMMTLDGLVAFLTEEVIVKELLEDLSCIYIGVLMQKHMEIAVLQFAATTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLHIESRMDLVSVLYPSFASLLGIEKLRQCCATWLIIEQYLLRCHNWKWEYAGESSKNGSENIIARRPVIARGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRPFKVHQSQVGMHEGMSYQMNHEPWFWFPSQTTIWDGPEFLGRVGIQKDDLPWKIRASVIYSIRAHHGAVRSLAVQDECTVFTAGIGQGYKGTVQKWELSQTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSVSKINSDQANVLNLNTLSNGIFSSAFDSSLYTCMHLLYSAETLVVGTGNGSLRFIDVARGQKLHIWRGESTESSFPSLISAICSTGSDKMQAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSANETDGQHHIIPQKLYVSDNGMRACPRYQVLVYFHSLDCFSLEPKMVI 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0690 1653 SMART WD40_4 1296 1338 IPR001680 GO:0005515
Ssu7g0690 1653 SMART WD40_4 1341 1378 IPR001680 GO:0005515
Ssu7g0690 1653 SMART WD40_4 1522 1560 IPR001680 GO:0005515
Ssu7g0690 1653 ProSiteProfiles BEACH domain profile. 335 605 IPR000409 -
Ssu7g0690 1653 ProSiteProfiles Trp-Asp (WD) repeats profile. 1529 1562 IPR001680 GO:0005515
Ssu7g0690 1653 Pfam Protein kinase domain 205 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0690 1653 CDD PKc 206 287 - -
Ssu7g0690 1653 Gene3D BEACH domain 339 590 IPR036372 -
Ssu7g0690 1653 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1529 1562 - -
Ssu7g0690 1653 ProSitePatterns Trp-Asp (WD) repeats signature. 1547 1561 IPR019775 -
Ssu7g0690 1653 Gene3D Transferase(Phosphotransferase) domain 1 684 796 - -
Ssu7g0690 1653 Gene3D - 1496 1626 IPR015943 GO:0005515
Ssu7g0690 1653 MobiDBLite consensus disorder prediction 82 117 - -
Ssu7g0690 1653 Pfam WD domain, G-beta repeat 1524 1560 IPR001680 GO:0005515
Ssu7g0690 1653 Pfam WD domain, G-beta repeat 1343 1378 IPR001680 GO:0005515
Ssu7g0690 1653 SUPERFAMILY BEACH domain 327 579 IPR036372 -
Ssu7g0690 1653 SUPERFAMILY Protein kinase-like (PK-like) 717 810 IPR011009 -
Ssu7g0690 1653 SMART Beach_2 347 579 IPR000409 -
Ssu7g0690 1653 MobiDBLite consensus disorder prediction 100 117 - -
Ssu7g0690 1653 PANTHER GH12955P 1 1628 - -
Ssu7g0690 1653 Gene3D Transferase(Phosphotransferase) domain 1 200 307 - -
Ssu7g0690 1653 SUPERFAMILY WD40 repeat-like 1299 1596 IPR036322 GO:0005515
Ssu7g0690 1653 SUPERFAMILY Protein kinase-like (PK-like) 206 286 IPR011009 -
Ssu7g0690 1653 CDD Beach 349 579 IPR000409 -
Ssu7g0690 1653 Pfam Beige/BEACH domain 349 560 IPR000409 -
Ssu7g0690 1653 Gene3D - 1293 1495 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0690 Ssu-Chr7 13950012 13969385 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Ssu7g0690 Beach 1.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0690 K17601 - gmx:100809116 3052.31