Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0677 ATGAACGGCGGCGGCACCGCCACGTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTGACCGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCCTGGAACAAATCACAGGCGATCCAACAGGTCATTTCCCTCAAAGCCCTTCTCGAACCTTCCGACGAGGATgcccctcctcctcctcctcctcctcctcctcccgCCATGCACCACCATGCCCCTCCCCCTCAACCCCAAGCCAATTTGACTGAACCTCCACCCCAGGCTCCGGTTGCTCAAGAGCCACCTTTTCATGCCGCCGACGACATTCACAAATCTGCCTCTTCTGGGGAAAAACCTACGGAAACTAATGACACCAGCACCAACGTTGCTAGTCCCAgAGGGTGTGCAACTAGTGCATCATTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTACGATGGAATCTCGCCTGATAAGGCACGAGCAATCATGCAGCTTGCGGTGAGTCCTGTTCAGTTTACTCAGGATGATCCCTTAAATGGAAATGCAGCAGTTTGGACTTCTTCTTGCCACTTACCGATGGATAAGGATGTCCTCGTCCCCGTTGATACAACAATCCTTCAGGTTGCTCAAGCAGATAAGATGCTGGAATATCCTCTGCAATACAGAGAGAAAGGGAGCATAGCTCGTGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCATTGCAGCGATATCGTGAAAAGCGTAAGGACAGGGGAAGATTGAAAGGCAAGAAATTGACTGGGATAACTTCATCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGTACTAGCTCTCCACCACAGCCTAAACTGCCTCTAGTTTCCAGTGGTTCAGCTGACAACCAGCTAAAAGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1017 0.4739 MNGGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDEDAPPPPPPPPPPAMHHHAPPPQPQANLTEPPPQAPVAQEPPFHAADDIHKSASSGEKPTETNDTSTNVASPRGCATSASFGQMTIFYCGKVNVYDGISPDKARAIMQLAVSPVQFTQDDPLNGNAAVWTSSCHLPMDKDVLVPVDTTILQVAQADKMLEYPLQYREKGSIARDADVEGQASRKVSLQRYREKRKDRGRLKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPKLPLVSSGSADNQLKVALPIDLNDKDVQEC 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0677 338 MobiDBLite consensus disorder prediction 291 318 - -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 125 139 - -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 240 260 - -
Ssu7g0677 338 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 323 IPR040390 -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 240 270 - -
Ssu7g0677 338 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 323 - -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 1 139 - -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 1 24 - -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 67 106 - -
Ssu7g0677 338 Pfam Jas motif 247 264 IPR018467 -
Ssu7g0677 338 MobiDBLite consensus disorder prediction 25 45 - -
Ssu7g0677 338 Pfam tify domain 150 177 IPR010399 -
Ssu7g0677 338 SMART tify_2 144 179 IPR010399 -
Ssu7g0677 338 ProSiteProfiles Tify domain profile. 144 179 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0677 5 293 Tify Gene Family AT4G14720 46.429 1.17e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ssu7g0677 tify 2.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0677 - - gmx:100808970 535.028