Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0667 ATGCATTCAGAAGGTGGTGTTACACCGAAGATGGAATTGGATGCTGAAGCTTTGAATTCAAAGATGATGAGTAGTGGAAACCTTAGCaggaaaaatatgatttttagagCTGATAAAAGTGATCTGAAGAATTTGGATGTCATGCTAGAAAAGCACTTCAGCAGAATTTTTTCCAAAAGCATTGAGGCAAAAAGGCCTAAAGAGGCATGGGAGATTGATTTGGCCAAATTGGATTTACAATATCCTGTAGCTAAAGGAGCCTATGGTACTGTCTACAGGGGTACTTATGACAGTCAAGTTGTTGCAGTGAAAGTCTTGGACTGGGGTGAGGATGGTGTTGCCACTGCTGCTGAAATTGCTGCTTTACGAGCATCATTTTGGCAGGAGGTTGCTGTATGGCAAAAACTTGATCATCCAAATGTCACAAAATTTATTGGAGCTTCCATGGGAACTTCAAATCTCAAGATTCCCTTGCCAACCTGTGGTCAAAATTCTCTTCCTTCCAAGGCGTGTTGTGTTATTGCTGAGTTTCTTCCTGGTGGGACATTGAAACAATACTtgtttaaaaataggaggagcAAACTTCCATATAAGGTTGTGATTCAGCTGGCTTTGGACCTCTCTAGAGGTCTCAGTTATCTACATTCAAAGAAAATTGTTCATCGCGATGTAAAAACTGATAATATGTTGTTAGAtgctaataaaaatttgaaaatagctgATTTTGGAGTTGCTTGTGTCGACGCTACAAATCAAAGTGAGATGACAGGTGAAACTGGAACCTATGGATATATGGCACCAGAGGTTTTAAATGGCAAGCCTTACAACAGAAAATGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTATAGCTGTAACATGCCTTATTCAAGGCTAAGCCTTGCTGCTGTGTCATGTCCAGTTATTAATCAGCATTTACGACCAGAGATTCCTAGATGTTGTCCAAGTGCCTTAGCAAACATCATGCGAAAATGCTGGGATGCAAAAGCAGAGAGGCGTCCAGAAATGCATGAGGTGGTGAAAATGTTAGAAGCAATTGATGCAAACAAAGGAGGTGGAATGATACCCAAAGATCGGACTccattttgtctttgttttttacCTTCTCGTCGTCCCTAA 1146 0.3822 MHSEGGVTPKMELDAEALNSKMMSSGNLSRKNMIFRADKSDLKNLDVMLEKHFSRIFSKSIEAKRPKEAWEIDLAKLDLQYPVAKGAYGTVYRGTYDSQVVAVKVLDWGEDGVATAAEIAALRASFWQEVAVWQKLDHPNVTKFIGASMGTSNLKIPLPTCGQNSLPSKACCVIAEFLPGGTLKQYLFKNRRSKLPYKVVIQLALDLSRGLSYLHSKKIVHRDVKTDNMLLDANKNLKIADFGVACVDATNQSEMTGETGTYGYMAPEVLNGKPYNRKCDVYSFGICLWEIYSCNMPYSRLSLAAVSCPVINQHLRPEIPRCCPSALANIMRKCWDAKAERRPEMHEVVKMLEAIDANKGGGMIPKDRTPFCLCFLPSRRP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0667 381 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 9 374 - -
Ssu7g0667 381 ProSiteProfiles Protein kinase domain profile. 77 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0667 381 Pfam Protein tyrosine and serine/threonine kinase 79 352 IPR001245 GO:0004672|GO:0006468
Ssu7g0667 381 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 374 - -
Ssu7g0667 381 CDD STKc_MAP3K-like 83 352 - -
Ssu7g0667 381 PRINTS Tyrosine kinase catalytic domain signature 213 231 IPR001245 GO:0004672|GO:0006468
Ssu7g0667 381 PRINTS Tyrosine kinase catalytic domain signature 323 345 IPR001245 GO:0004672|GO:0006468
Ssu7g0667 381 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Ssu7g0667 381 PRINTS Tyrosine kinase catalytic domain signature 175 188 IPR001245 GO:0004672|GO:0006468
Ssu7g0667 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Ssu7g0667 381 SMART serkin_6 77 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0667 381 SUPERFAMILY Protein kinase-like (PK-like) 60 352 IPR011009 -
Ssu7g0667 381 Gene3D Phosphorylase Kinase; domain 1 66 161 - -
Ssu7g0667 381 Gene3D Transferase(Phosphotransferase) domain 1 180 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0667 Ssu-Chr7 13560061 13562988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0667 24 381 MAP Kinase Kinase Kinase AT3G22750 70.474 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ssu7g0667 PK_Tyr_Ser-Thr 1.7e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0667 - - gmx:100807899 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0667 7 13560061 13562988 Ssu2g3070 2 92374344 92377353 PCT