Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0663 ATGTTCTCTTCCACATATGACTCCAGCCTTTTCCCAACCTTCCCCTTGTCTTCTTACCCTACCCTTCCTTTTCTCGTTGATcctgaaaatgattttggaagaaacACCTTTCTTGATGACCCTTTTCTTGTTCCCTTCTTACCCACTACTCATGATCCTCCATTCCCTGAAGAAACTGTTGCCAATTTTGCAGTTGCAGACTGCGCTGCCATGCTTGAACAGGATGCAAACACTAACTATGGTTCCCACTATGGAAGCATTTCCAATTTTCTCACCCAGAAACCAGCCATAGCCAAGAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGCAGGGTGAGATTATCAAGCGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTCTTCACAAAGTCTGAGAATGCAATCAAAGAACTAGCTCGAAGTAAGCATAGCGGCAGTAGTAGTGGGGGCGACAAGTGTTCCTGCGACCCTTCTGTAGATTCAAATAACAACAAATCATTGGTGGGTAGTGGGGGTGATGGTTCTAAAGGGAGGAAGTTGAAATGGTCACAGAGGGATGATGTTTGTGTTCAGACCAAAAAGGAGTTAAGGGAAAGGGCAAGAGCAAGAGCAAGAGAAAGGACATGTTACAAGATGTGTAGCAGTAGAAGGGTGCAGCAAGACTATGATGAGAGGTGCCCTGCAACTGCAACCACTCAAATGCTGCACCAATTGAGGTCATCCATTCAGCCTGAACCTGAAGCTAGTGCAAGATGGGTTCAGCCTTATAACCCTTATCTCGTTGATGGTGAAGCACCAAGAGATGGCTTTAACGTCATTGAAGAATCTATTATGAAAAAAAGGAACATGAAGCCGTCTTCTCATCACCAAAACCTTGCGATCCCTAGGGATGCAAGTTTCAACAACAATGAGTTCCCCCTATTACCCTACTCCACTCCAAACTGGGACACTAATGGGGCCGTTAATGGATGCTCCAACTTTTGTGGAATAGGCACCATGAATCTATCTACATGTTTCATGAACCCGTgA 1086 0.442 MFSSTYDSSLFPTFPLSSYPTLPFLVDPENDFGRNTFLDDPFLVPFLPTTHDPPFPEETVANFAVADCAAMLEQDANTNYGSHYGSISNFLTQKPAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELARSKHSGSSSGGDKCSCDPSVDSNNNKSLVGSGGDGSKGRKLKWSQRDDVCVQTKKELRERARARARERTCYKMCSSRRVQQDYDERCPATATTQMLHQLRSSIQPEPEASARWVQPYNPYLVDGEAPRDGFNVIEESIMKKRNMKPSSHHQNLAIPRDASFNNNEFPLLPYSTPNWDTNGAVNGCSNFCGIGTMNLSTCFMNP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0663 361 MobiDBLite consensus disorder prediction 159 189 - -
Ssu7g0663 361 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 19 357 - -
Ssu7g0663 361 MobiDBLite consensus disorder prediction 158 200 - -
Ssu7g0663 361 Pfam TCP family transcription factor 98 233 IPR017887 -
Ssu7g0663 361 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Ssu7g0663 361 ProSiteProfiles R domain profile. 213 230 IPR017888 -
Ssu7g0663 361 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 357 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0663 Ssu-Chr7 13440202 13441373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0663 97 252 TCP Transcription Factor Family AT1G67260 39.326 4.01e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ssu7g0663 TCP 2.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0663 - - aprc:113871835 600.512