Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0660 ATGTATCCAAAGGTCTTTCCGTTTGCAAACTCAAAATGCAGAAGGTATTTCTACAACCGCTTGAAGCTATCAAAGCTTACCTTGACTGCAATGTATAGGAAGCAACATAAGAAGGACATTACTCAAGAAGCTGTGAAAAAGAGGCGCAGTGCTACCAAAAAGCCTTACTTTATGTCCATTGTTGATGCCACTTTGGAAGTTATCCAGAAAAAGAGAACTGAGAAGCCAGACGCAGCCAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGACCAAGAAAACAAAGGATGAGAAAAAGGCTAAGAAAGCAGAAGTTGCAGCTAAGACGCAAAAATCACAAGGGAAAGGAAATGTTTCGAAGGATGCTATGCCCAAGTGTCCCAAACTCGGTGGTGGAGGCGGGAAACGCCGAGTTTAG 417 0.4341 MYPKVFPFANSKCRRYFYNRLKLSKLTLTAMYRKQHKKDITQEAVKKRRSATKKPYFMSIVDATLEVIQKKRTEKPDAAREAALREIKERTKKTKDEKKAKKAEVAAKTQKSQGKGNVSKDAMPKCPKLGGGGGKRRV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0660 138 PANTHER 60S RIBOSOMAL PROTEIN L24 4 136 - -
Ssu7g0660 138 Coils Coil 84 104 - -
Ssu7g0660 138 Gene3D Ribosomal protein L24e 2 39 IPR038630 -
Ssu7g0660 138 PANTHER 60S RIBOSOMAL PROTEIN L24 4 136 IPR000988 -
Ssu7g0660 138 MobiDBLite consensus disorder prediction 72 138 - -
Ssu7g0660 138 Gene3D - 44 111 - -
Ssu7g0660 138 MobiDBLite consensus disorder prediction 72 108 - -
Ssu7g0660 138 Pfam Ribosomal protein L24e 4 42 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0660 Ssu-Chr7 13361751 13362781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0660 4 129 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 74.419 4.15e-50 155