Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0641 ATGGAACGGGGCACGAGAATTGGTAGTCCTTCTGGGGTTGTGGTGAAGAATAGGAGCTCTTCGGGGTGTTTAATTGTTAGGAAGAAAGGGGATGGTTTGGGTGCTGGGATTGGTGGTTCTTCGAGTTCTCGGAGGCAGTATGAATCGAAGAAAGTGAGGAGAAAACCTAAGGTCGAATTAAGTGATTCGGGATCAAGTGATGAGTTACTCATGCCTCCTTCTAGGAGGCTTGGCCCTGAGACCATTCGAGTGTGTAATAGTTTGAATGCCTTCGAGCGGGGTATGGTTGGTGGAGGTGAAATCAgtaggaagaggaagagaatggAGCAAATTAGGCACAATGGGGATGGCATGGTCGAGGAGAATGGCTTGGAGAGGAGGGAAAGGAAGCTGAGTAAGTTGGATGTGTTTGATTTCAATGAATACGATGGTATGGATGTGGAAATGAGGAGGAGGAGGCATTTTGATGATAATGGGGTTGGTATAGGAGGAGGAAGGTTTGTGCGAGCAATGCATGCTGCTAGAAGTGGCATTGATAGCGAATTTGAAACCGGTTCAAACAGACACATTGTGGACAAGAGAAACAACTCCTATTATGACAGAGCAGGTGGCTTGTATCTGGGAGATAGTGTTGATCATAGTAGGTTCAAGATGAACAGGGATGGAGCTCAGCGTCCTCTACCATTGTTGAGGGAGAAATTTAAGTCAGATGAATCCATTAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTGATGGTTAATAAGAAGGTGGGTGGGCCACCGGAACATTATGATCATCGCAAACCTGTAGAAAGCAGACAAAGTTTGAGGGCTGAGGGCACTGCCAAGAGGAATGTCCTGATCCATCCTTCATCTTACTTGGAAACAAAACCTGTTGAGAAACAGGCTTTACAAGTTAGGCCAGAGAAGAAACAGATAGCAACAAGAAAATCATTGTCAAGTAAGGACAGTAGGGGTGATGAGCGGGATTCAGATAACAGTGACACATCATTAAATCTAGgagtaaaaaatattgaagttcGCAAGTCTTCAAAGAAGATAACCTCTGAAGATGAAGAGACACCTGCACATGAAAAACTCCCAACTACAAGAacgaaagaaggaaaaatcaGGCGTGGCAGTGGCACAGAAAAGCAGAAACTACGAGAGCGAATACGAGAGATGCTGCTGAAGGCAGGTTGGACCATAGACTATCGCCCTCGAAGGAATAGAGACTATCTAGATGCAGTGTACATTAACCCAGGAGGTACAGCCTATTGGTCTATCATCAAGGCTTATGATGCACTTCAAAAGCAATTGAATGATGATCATGAGGCCAAGCCCAAAGGGGGGGAGAGTTCTTCTTTTGCTCCTATCTCTGATGATGTGCTTAGTCAACTGACAAGGAAAACACGAAAGAAGATGGAGAAAGACTTGAAGAAGAAAAGCAGAGAAATGATAGTGAGAGTGATAGTGGAAAAGAACCAAAGATTAAAAGAACTGCCAGCAAAAGACATGATATGA 1524 0.4291 MERGTRIGSPSGVVVKNRSSSGCLIVRKKGDGLGAGIGGSSSSRRQYESKKVRRKPKVELSDSGSSDELLMPPSRRLGPETIRVCNSLNAFERGMVGGGEISRKRKRMEQIRHNGDGMVEENGLERRERKLSKLDVFDFNEYDGMDVEMRRRRHFDDNGVGIGGGRFVRAMHAARSGIDSEFETGSNRHIVDKRNNSYYDRAGGLYLGDSVDHSRFKMNRDGAQRPLPLLREKFKSDESIRVQGKNGVLKVMVNKKVGGPPEHYDHRKPVESRQSLRAEGTAKRNVLIHPSSYLETKPVEKQALQVRPEKKQIATRKSLSSKDSRGDERDSDNSDTSLNLGVKNIEVRKSSKKITSEDEETPAHEKLPTTRTKEGKIRRGSGTEKQKLRERIREMLLKAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDDHEAKPKGGESSSFAPISDDVLSQLTRKTRKKMEKDLKKKSREMIVRVIVEKNQRLKELPAKDMI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0641 507 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 485 - -
Ssu7g0641 507 PANTHER PHD FINGER FAMILY PROTEIN 1 485 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 346 387 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 1 20 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 442 480 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 256 387 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 28 77 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 466 480 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 302 334 - -
Ssu7g0641 507 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0641 Ssu-Chr7 13059547 13061070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0641 1 482 PHD Transcription Factor Family AT4G14920 42.540 1.73e-83 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0641 - - mtr:MTR_1g103830 691.804