Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0639 atGAATGGTGCTGCATGTGTTGAGGCAGAGTGCTGTGAGTTTGTGGAAGTTGATCCCACGGGAAGATATGGAAGATACAATGGAATTCTTGGCAAAGGAGCTTCCAAGACAGTCTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGTTATACAGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCCAACAGGCACATTAACTTTGTCACTGAGATGTTTACCTCTGGGACTCTAAGACAGTACAGACTTAAACACAGACGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGATTTTAGAAGGGCTCCTCTATCTGCACAGCCATGATCCTCCTGTGATCCATAGAGATCTAAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAACGATGCTCGCTGTGTTGGCACACCTGAGTTTATGGCTCCAGAAGTGTATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACTTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATCTATAAGAAAGTTGTCTCTGGGAAGAAGCCAGAAGCTCTTTACAAAGTAAACAATCCCGAGGTTAAGCAGTTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCTAAGGAACTCTTGGAGGACCCTTTTCTCCAAATTGATGATTATGGATATGACTCAAAAGTAGTGCAGTATCAAAGAGATTGCTATGAAGTAAACCCATTAATTAGACAACCTTTGAATGGAATTTACAGCGTTAACAACACCTTAATGAGTGTGTACACTGATAATCTTGGTGGTTATGGACCTGTACCTGAATTGGATTATCATCAAGACGATTTTGATCCAAGTGAAATTGGTCTCTTTGACTGTGAAGAGGATGACAATTTGGCTGAAGTTGACACCACAATCAAAGGTAGGAGAAGAGAAGATGATGACGTCTTTTTGAGAATCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTACTTCCCATTTGACATTGAGACTGATACTGCATCGAGTGTTGCAAATGAAATGGTAGCTGAGCTTGACATAACTGACCAAGATCTAACAAAATTAGCAAATATGATAGACAATGAAATTGCAACATTGGTTCCAGAATGGAAAACAGGACCAAGAGTAGAGGAAAATTCAGAATGTTCAAGTGCAAGTGTCTGCTGCCTCAATTGTGCTGCAAACGGTTCCTTGTTTGATTATGTATCATCAAATAATCCATGTGGCAAGAACCTTCAATTTCTTCATTGTTCTAAAAATGGATGTGCTGCAGTTCATGGCCGATTTGAAGAGATAACATACCAAGTTGAAGACTCTGGAAATAGTGCTACAGAAGGTGCACCAGATGCATCAAGCCAATCCAATGGCATTCACTATACCGATATCTGGGCTCAGCGAGATGAGCCAGAGTTATGCCATGAAGAGTTAAAAGACATACACTGTGATCAAGCTCATGAGGCATCAAACCCATCAAACATCAAGGAGGATGGAAAAACTGTTAATGTGGATGAGCAAAGTGATCTAAATACCAGAAAGCCTCCTTCAAACCCTGCACCAAATTGTGTTCTCTTGGACTATGAAAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCACCAACTAGGGGGTAAACCAAAATTTACTAGCATATCTCCTGACACTGAAAAATTAGAGCATGGAAAAGATGGAATTATGAGGCTATCAGCTACATCCAACTTGaagatacaaaacaaaaaaccacTATTGAGATCTATTGCTTCTGGGAAGCATTTTCCTGTTGATGCCGAGAAATGCACCACTTTGGCTGATCAAATGATTCAAAATGTTAATGAGATTAGTCAGTCCAACAGTCCTGAGGAAATGGTCACAGCCAAGGATTTCTTTACAGGAGCTTTGCTCCCTCACTCACTTCACAGGGCAACCTCACTTCCTGTTGATGCAGTAGATGTCTAG 2199 0.4015 MNGAACVEAECCEFVEVDPTGRYGRYNGILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNDARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVNNPEVKQFVEKCLATVSLRLSAKELLEDPFLQIDDYGYDSKVVQYQRDCYEVNPLIRQPLNGIYSVNNTLMSVYTDNLGGYGPVPELDYHQDDFDPSEIGLFDCEEDDNLAEVDTTIKGRRREDDDVFLRIRIADKEGRVRNIYFPFDIETDTASSVANEMVAELDITDQDLTKLANMIDNEIATLVPEWKTGPRVEENSECSSASVCCLNCAANGSLFDYVSSNNPCGKNLQFLHCSKNGCAAVHGRFEEITYQVEDSGNSATEGAPDASSQSNGIHYTDIWAQRDEPELCHEELKDIHCDQAHEASNPSNIKEDGKTVNVDEQSDLNTRKPPSNPAPNCVLLDYENEIRQELRWLKAKYQMQLRELRDHQLGGKPKFTSISPDTEKLEHGKDGIMRLSATSNLKIQNKKPLLRSIASGKHFPVDAEKCTTLADQMIQNVNEISQSNSPEEMVTAKDFFTGALLPHSLHRATSLPVDAVDV 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0639 732 Gene3D - 376 459 - -
Ssu7g0639 732 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 721 - -
Ssu7g0639 732 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 379 433 IPR024678 GO:0004674|GO:0005524
Ssu7g0639 732 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0639 732 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Ssu7g0639 732 CDD STKc_WNK 22 281 - -
Ssu7g0639 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Ssu7g0639 732 Pfam Protein kinase domain 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0639 732 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Ssu7g0639 732 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0639 732 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 721 - -
Ssu7g0639 732 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0639 Ssu-Chr7 13020668 13023675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0639 1 502 MAP Kinase Kinase Kinase AT3G22420 57.514 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ssu7g0639 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0639 K08867 - gmx:100804179 1340.1