Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0610 ATGGATAACCCCATGTGCAATCCCGTGGCTCCAGGTGCACCTAGCTTGGCTGGACTTGGGTGCTCTAGAATGATTGTGTGTGTTGCTGGCAGGGACAGTTTAAGGGAGAGAGGAATTTGGTATTATGAATCTGTGAAGAAAAGTGGGTGGCAAGGAAAACTGGAattctttgaagaaaaagatgTAGGTCATACTTATCATTTGTCAAATGTAGAATCTGAGAATACCAAGAAATTGATCAAGCACTTGGCTTCTTTTCTCCAGGAGTAA 270 0.4074 MDNPMCNPVAPGAPSLAGLGCSRMIVCVAGRDSLRERGIWYYESVKKSGWQGKLEFFEEKDVGHTYHLSNVESENTKKLIKHLASFLQE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0610 89 Pfam alpha/beta hydrolase fold 2 67 IPR013094 GO:0016787
Ssu7g0610 89 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 1 88 - -
Ssu7g0610 89 SUPERFAMILY alpha/beta-Hydrolases 15 89 IPR029058 -
Ssu7g0610 89 Gene3D alpha/beta hydrolase 1 89 IPR029058 -
Ssu7g0610 89 PANTHER ARYLACETAMIDE DEACETYLASE 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0610 Ssu-Chr7 12443258 12443527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0610 1 89 Carbohydrate Esterase AT1G19190 40.449 4.45e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0610 - K13258 aprc:113873855 140.584