Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0602 ATGCAAGACTTTTGGGGCTCCCTTCGCCGCTCCTTGGTTTTCCGACATGGCGGTGACGATGCTCCTTTTGCCGGAATTGCCGACAAGCTTGGCTCCGCCATTCGCAAATCGCGAATCGCACTTAAACCTCTTCCTCCTCCGATACGGTGGCGCAAGGGCGAGTTGATCGGTTCCGGCGCCTTCGGTCGCGTCTACATGGGAATGAACCTCGACTCCGGGGAGCTTATTGCCATCAAACAGgttttaatCGCGCCTGGTAGTGCTTCCAAGGAGAGTACACAGGCTAATATTTGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTaGATACTTGGGAACTGCTAGAGAGGAGGATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTTCCCGAGTCTgttataaaaatgtatacaaAACAGCTTTTATTGGGCCTTGAATACCTTCACAATAACAGGATTATTCACCGGGACATTAAGGGTGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTCGCAGATTTTGGGGCATCCAAGAAAGTTGTTGAACTGGCCACCATCAATGGTGCAAAGTCAATGAAGGGTACACCACATTGGATGTCTCCTGAAGTTATTTTACAGACAGGACATACAATCTCTACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGAGGTTTCAGCTCTTTTCTACGTCGGGACAACTAAATCTCATCCACCCATACCTGAACATTTGTCTGCTGAGGCAAAGGACTTTTTGCTGAAATGCTTCCAcaaGGAACCAAATTTAAGGCCTTCTGCATCAGAATTGTTACTGCATCCATTCATCGCCCGTGACTATCATGAATCACATTCAATATTACGCAGTTCAATCAGGGACTCTTGCAATAAGATGGCTACATATGGGATGACCTCTACAAACTTTTTGGATTCTGTCCAGGGATCAACTTGCACAGGCTTAAAGGATGTTTGTCAGATAGATAGCATAAGGCTTTCAACCGTATATCATAAAGCAGGTTCCTATCAGAGAGCAGACAACTATGATGATGACATGTGTCAGATGGATGATGAAGATGATTTTTTGGTGGGTCCATCAGTAAAATCTGAATCTCTATTAGCTTCTGATATGAAGAGTTTCAATCCTATGTGCAAACCTGTGGATGACTGGCCGTGCAATTTCGATGAAACTCAATATTTGGGGAAAAGCAGACCAAACTTGTATCAAGATCAAACTATTAATAAAACTATGAGAAGTCTCAAACCATCTCTGAAGGCGGAGAATGAATTCTCATTTTCAAGTGAGCCTTTAGGAactgaagatgatgatgaagtTACTGAGTGTAAAATTAGAGCTTTCCTGGATGCTAAGGCCCTTGAACTGAAGAAGCTTCAAACACCTCTTTATGAAGAATTCTTTAGCATATCAAAAACAGCTATTGCTCCTGCTCCCATTGCGGTTGCACAGAGTAAAGTTATTTCAGATGTCTCAAATGTAACATCAAAAGGCAGGTCTCCTATTCAGGCTTGGAGACGATTCTCAATGGTTGGCAGATCCAATGTTGCAAGCCCTGTGGGTCATAGCAAATACCAATCAAAGCTTAGTGATGCTCACTGTCAACCTTTGCAGGAAATCCAGCCATCTGAGCTTAATGAGTCAAAGGAGACTCTTCATGATGCTGGGCTGGAATCATTTAGTGTTAGCTCAAGCTTCTCTGACAGGCAAAGGAAATGGAAAGAAGAACTGGTTGAAGAGCTTGAGTGGAAGCGAGAGATGATGCGTGAGGCAGGAAGTGGAGGGAAGATAACATCTCCAAAGGATCGCAAATTTTATGGAGACTGA 1950 0.4292 MQDFWGSLRRSLVFRHGGDDAPFAGIADKLGSAIRKSRIALKPLPPPIRWRKGELIGSGAFGRVYMGMNLDSGELIAIKQVLIAPGSASKESTQANIWELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHNNRIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSALFYVGTTKSHPPIPEHLSAEAKDFLLKCFHKEPNLRPSASELLLHPFIARDYHESHSILRSSIRDSCNKMATYGMTSTNFLDSVQGSTCTGLKDVCQIDSIRLSTVYHKAGSYQRADNYDDDMCQMDDEDDFLVGPSVKSESLLASDMKSFNPMCKPVDDWPCNFDETQYLGKSRPNLYQDQTINKTMRSLKPSLKAENEFSFSSEPLGTEDDDEVTECKIRAFLDAKALELKKLQTPLYEEFFSISKTAIAPAPIAVAQSKVISDVSNVTSKGRSPIQAWRRFSMVGRSNVASPVGHSKYQSKLSDAHCQPLQEIQPSELNESKETLHDAGLESFSVSSSFSDRQRKWKEELVEELEWKREMMREAGSGGKITSPKDRKFYGD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0602 649 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Ssu7g0602 649 CDD STKc_MAPKKK 49 313 - -
Ssu7g0602 649 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 34 547 - -
Ssu7g0602 649 Coils Coil 90 110 - -
Ssu7g0602 649 PANTHER MAP KINASE KINASE KINASE 34 547 - -
Ssu7g0602 649 MobiDBLite consensus disorder prediction 629 649 - -
Ssu7g0602 649 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0602 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Ssu7g0602 649 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0602 649 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0602 649 SUPERFAMILY Protein kinase-like (PK-like) 49 339 IPR011009 -
Ssu7g0602 649 Gene3D Transferase(Phosphotransferase) domain 1 49 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0602 Ssu-Chr7 12252257 12259196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0602 1 637 MAP Kinase Kinase Kinase AT3G06030 54.902 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu7g0602 Pkinase 1.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0602 - K20606 ccaj:109794823 1048.11