Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0598 ATGGTTCCTTTATTAGAGTGTGTCCTAGGatatttaattattgccATAATATGGTCTACTTTGGCTGTACTAGGATACATAGGGGACTTCGAATATGTTAATGATCACAGGGCTGGCAAAACCATGGTAGAATTGAATGGCAGGTTGAACAAGTGTGGTGTTATTAGTCCCCACTTTGATGTTGGTGTCAAAGAGATAGAAGGTTGGACTATAAGCTACTTCCCTCAAGATAGtaaGCTTAAATTGAAGTTATCCACACAAAGTCCCTAA 270 0.3741 MVPLLECVLGYLIIAIIWSTLAVLGYIGDFEYVNDHRAGKTMVELNGRLNKCGVISPHFDVGVKEIEGWTISYFPQDSKLKLKLSTQSP 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0598 89 PANTHER 40S RIBOSOMAL PROTEIN S15A-1-RELATED 22 78 - -
Ssu7g0598 89 Gene3D - 50 88 - -
Ssu7g0598 89 PANTHER 40S RIBOSOMAL PROTEIN S15A 22 78 IPR000630 GO:0003735|GO:0005840|GO:0006412
Ssu7g0598 89 SUPERFAMILY Ribosomal protein S8 15 71 IPR035987 GO:0003735|GO:0005840|GO:0006412
Ssu7g0598 89 Gene3D - 12 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0598 Ssu-Chr7 12232000 12235477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0598 3 75 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 60.274 3.19e-27 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0598 K02957 - gmx:100798674 93.9745