Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0588 ATGGCACATCAAGGGGAATCGATGAAGCTGTGGTGGGGCGAGCTGGAGGAGGACAACGATGAGGATCTAGACTTCCTTGTGCCGCTATGGCAGGTGATAGGGCCGGACAAGAACGACATAAAGAAGGTGATCGAGTACAAGTTCAACGAGGACAACAACAAGGTCAAGATCACCACCACGCACACCTGCAAGCTCACCAACGCGTGTCTGAGTAAACGCCTCGTCGAGTGCCCTTCTTGGCCCAAGTTCGAGGACGTCGTCCACGAGGACGTCGACAGCCGCCTCACCACGGTCTCCACTGAAGAGATCCTCCTCGAACGCCTTAAGCCTCTcgGGGTGATATTCTTCAAAATCATTTCTATTCGGTGGTGGCGACTGTGGGTGGTTGCAGCTCTGGCAACTCATGTCTCGGAGGTGACGGTGGCGGAGACAATACTGGTGGTGTTGTCGGGTTGCCGAAATATCCGAGGCAATGAGGAGTTGAACGCGAGAGTCTTCACAGATGTCATAAGAATGGAGGTTGTAGGAACAGTCAAATCAACCCACTAA 549 0.5301 MAHQGESMKLWWGELEEDNDEDLDFLVPLWQVIGPDKNDIKKVIEYKFNEDNNKVKITTTHTCKLTNACLSKRLVECPSWPKFEDVVHEDVDSRLTTVSTEEILLERLKPLGVIFFKIISIRWWRLWVVAALATHVSEVTVAETILVVLSGCRNIRGNEELNARVFTDVIRMEVVGTVKSTH 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0588 182 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 109 - -
Ssu7g0588 182 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 109 - -
Ssu7g0588 182 Pfam Eukaryotic translation initiation factor 3 subunit G 32 107 IPR024675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0588 Ssu-Chr7 11989401 11990999 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0588 4 112 Eukaryotic Initiation Factors Gene Family AT3G11400 57.273 1.67e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0588 K03248 - gmx:100818725 148.673