Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0583 ATGGCACATCAGGGGGAATCGATGAAGCTGTGGTGGGGCAAGCTGGAGGAGGACAACGATGAGGATCTAGACTTCCTTGTGCCGCTATGGCAGGTGATAGGGCTAGACAAGAACGACATAAAGAAGGTGATCGAGTACAAGTTCAACGAGGACAACAAGGTCAAGATCACCACCACGCACACCTGCAAGCTCGCCAACGCGTGTCTGAGTAAACGCCTCGTCGAGTGCCCTTCTTGGCCCAAGTTCGACGACGTCGTCCACGAGGACGTCGACAGCCGCCTCACCACGGTCTCCACTGAAGAGATCCTCCTCGAACGCCTTAAGCCTCTCgGCACGTGCTTAATTAATTGGGTTCGCTTGCTTGCTTGA 369 0.5447 MAHQGESMKLWWGKLEEDNDEDLDFLVPLWQVIGLDKNDIKKVIEYKFNEDNKVKITTTHTCKLANACLSKRLVECPSWPKFDDVVHEDVDSRLTTVSTEEILLERLKPLGTCLINWVRLLA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0583 122 Pfam Eukaryotic translation initiation factor 3 subunit G 32 106 IPR024675 -
Ssu7g0583 122 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 108 - -
Ssu7g0583 122 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0583 Ssu-Chr7 11888683 11889167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0583 4 116 Eukaryotic Initiation Factors Gene Family AT3G11400 56.522 8.86e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0583 K03248 - gmx:100818725 148.288