Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0577 ATGTGGGAGAGGTTGGCCACTTCAACAGCATACTCTGGGATACCGATGAATGATGTGAGAAATCGAACAGCAAGTGCTCCTATTGGCTCAATGAAGTTTGGCTACAAGTCAGTTTACATCACAGCTAACCAAACGTTGTATGCAATGGAATGGTGCATCCCTTACCTTTCCTCGGACAACTGCCGTTGGAGTCTCAGTGATGCCATAGCAGAAATTCCAACCTCCTGTTGTAGAGGAAAAACTGGAGGGAGAGTTATTTACCCCAGTTGTGGTGTTAGATATGAATTATATCCATTTTACCATCCACTCACTTCGGAGACATTGCCACAACTACCTAATTCACTGGCTCCACTTCGCCCTTTGGCACCATCAGGTAAACGAAAACATTCAGTATCAGTAATAGTTGTGGTTGTCCCAGTTGTTATATCGGTGCTGCTGTTATCCCTGAGCTGCAGCTGTTTTCTAAACAGTAGAAGGAGGAAGAATCACGAGACTATTCTCAAAGAAAATTTTGGGAGTGAAGTTGCTACGTTGGAATCCTTGTGGTTTGATTTAGACGAAATTGAATCTGCAACAAACAAGTTTGCTAAAGAAAATATGATTGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTACTTTCTAATGGGCAAGAGGTAGCTGTGAAGAGGCTTTTGGGAAGCTCCGGGCAATGGGAAgtagaatttaaaaatgaggTTCTTGTTATAGCTCAACTTCAACACAGAAATTTAGTGAAATTACAAGGATTTTGTTCGGATGGACAAGAAAAAATACTCATATATGAATATGTACATAACAAGAGTCTGGATTACTTTCTATTTGATCCCCAGAAGAGAAGACTATTAAATTGGTTTGTACGGTATGAGATTATTAAAGGAATTGCTCGAGGAATTCTTTATCTTCATGAAGATTCCCGCCTTAAAATTATACACCGTGATCTCAAACCTAGTAATGTTTTGTTAGACGTTAACATGAATCCAAAAATCTCAGATTTTGGAATAGCAAGAATTGTTGCAGCCgataaaatggaagaaaatacaCATAGAATTGTTGGGACTTAG 1083 0.3832 MWERLATSTAYSGIPMNDVRNRTASAPIGSMKFGYKSVYITANQTLYAMEWCIPYLSSDNCRWSLSDAIAEIPTSCCRGKTGGRVIYPSCGVRYELYPFYHPLTSETLPQLPNSLAPLRPLAPSGKRKHSVSVIVVVVPVVISVLLLSLSCSCFLNSRRRKNHETILKENFGSEVATLESLWFDLDEIESATNKFAKENMIGKGGFGEVYKGVLSNGQEVAVKRLLGSSGQWEVEFKNEVLVIAQLQHRNLVKLQGFCSDGQEKILIYEYVHNKSLDYFLFDPQKRRLLNWFVRYEIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDVNMNPKISDFGIARIVAADKMEENTHRIVGT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0577 360 Pfam Salt stress response/antifungal 32 97 IPR002902 -
Ssu7g0577 360 Gene3D - 7 99 IPR038408 -
Ssu7g0577 360 Gene3D Transferase(Phosphotransferase) domain 1 271 360 - -
Ssu7g0577 360 ProSitePatterns Protein kinases ATP-binding region signature. 201 223 IPR017441 GO:0005524
Ssu7g0577 360 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 360 - -
Ssu7g0577 360 Gene3D Phosphorylase Kinase; domain 1 155 270 - -
Ssu7g0577 360 ProSiteProfiles Gnk2-homologous domain profile. 1 99 IPR002902 -
Ssu7g0577 360 SMART serkin_6 195 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0577 360 ProSiteProfiles Protein kinase domain profile. 195 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0577 360 Pfam Protein kinase domain 196 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0577 360 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 16 360 - -
Ssu7g0577 360 SUPERFAMILY Protein kinase-like (PK-like) 175 360 IPR011009 -
Ssu7g0577 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0577 Ssu-Chr7 11791631 11793125 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0577 26 360 Receptor kinase-like Gene Family AT4G05200 52.212 1.51e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu7g0577 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0577 - - gmx:100793219 410.994