Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0565 ATGGCTTGGAATTCCTTCAagcttctctttctctttgtccTTGTTAGCTTCCTCAGTTTTGCAACAACTAAGGCACAAGGCCCTACTTTTCTTTACCAGGATTGCTCAAGCAACAAAACCACAACCAACAGCACCTACCAATTAAACCTCAGGACCCTCTTCTCTTCACTATCTTCCAACGCTACCGCCAACAATGAATTCTACAACGCCACAGTCGCGGGAAGAAACCCCTCTGACACAGTCTATGGACTTTTCATGTGCAGAGGTGACGTCCCATTTCAGCTGTGTGGACAGTGCGTGGTAAACGCAACACAGAAACTATCATCAGATTCGGACTGCTCCTTGTCCATACAGGCTGTGATCTGGTACGACGAGTGCATGGTTCGCTATTCCAACCACTCCTTTTTCTCCACCGTAGactcaaatttttatgttgGCCTGTCAAACTCCGCCAATATCTCAAACCAGGCAACCTTCATGCGTTTGTTGTTCGACACCATGAACAAAACAGCAGATGAAGCAGCTATTGGTGCTGAGAAATATGCCACGAATCAAGCAAACATATCTGGATTTCAGTCCCTTTATTGTCTGGTTCAGTGCACGCAGGACTTGTCACCCCAACGTTGCAGAAGTTGTCTTAGTTCTGCCATAGGGCTCCTTCCATGGTGCTGTGAAGGAAAGCAGGGAGGGAGAATTCTAAATCCCAGCTGTAATGTTAGGTACGAATTGTACCCTTTCTATCGCACAACCATCACTGCTCCCGCACCAACGCCTACACCATCAGGGTCTGTTCCTCCTACTCCAACCAATTCTTCTAACTCGGGAGGAAGTAGCGGGATCTCATCGGGGACAATTGTTGCAATTGTGGTACCAATTACGGTGGTTGTGCTGCTATTTATTGTGGGCATTTGGCTCTTGATTAAAAGAGCAGCAAAGAAGCGTAACTCTGCCCAAGACCCAAAAACTGGAACTGAGATCAGTGCCGCGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGCAGCCACAAACAAATTCTCTGATGCTAACAAGCTAGGTGAAGGTGGATTTGGTGAGGTTTACAAGGGTTTACTTCCTAGCGGACAAGAAGTAGCTGTCAAGAGACTCTCTAAAAGCTCTGGACAAGGTGGGGAAGAATTTAAGAATGAAGTAGAGGTGGTTGCAAAGCTTCAACACAGAAATTTAGTGAGGCTTCTAGGATTTTGCttggaaggagaagaaaagataCTTGTTTACGAATTTGTAGCTAACAAAAGCCTTGACTATATTCTTTTTGATCCTGAAAGGCAAAGATCATTGGATTGGACAAGGCGTTACAAAATTGTCAAAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAAAATTATACATCGTGATCTTAAAGCCAGCAATGTATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGCAAATACCAATAGGATTGTAGGGACATATGGTTACATGTCTCCGGAGTATGCAATGCATGGAGAATACTCTGCTAGGTCTGATGTATACAGTTTTGGAGTCCTCATTTTGGAGATTATAAGTGGCAAGAAGAACAGCTCTTTCTATGAAACAGACGTTGCTGAGGATCTATTGAGCTATGCCTGGAAACTTTGGAAGGATGAAGTACCTTTGGAGTTGATGGACCACTCATTAAGAGAATCATGTACTCCAAATGAAGTTATCAGATGCATCCATATTGGTTTACTCTGTGTCCAAGAAGATCCAGCAGATAGACCTACAATGGCATCAGTAGTTCTTATGCTTGATAGTTACACTGTTACTCTACCCGTACCTAATCAGCCTGCATTCTTTATAAATAGTAGAACTGAACCAAACATGCCAAAAGAACTTAAAATTGATCAGTCTACTACCAATTCGACAACAAAATCTGTCAATGAGATGTCGGTTAGTGAAGTGGATCCTCGATAA 2016 0.4187 MAWNSFKLLFLFVLVSFLSFATTKAQGPTFLYQDCSSNKTTTNSTYQLNLRTLFSSLSSNATANNEFYNATVAGRNPSDTVYGLFMCRGDVPFQLCGQCVVNATQKLSSDSDCSLSIQAVIWYDECMVRYSNHSFFSTVDSNFYVGLSNSANISNQATFMRLLFDTMNKTADEAAIGAEKYATNQANISGFQSLYCLVQCTQDLSPQRCRSCLSSAIGLLPWCCEGKQGGRILNPSCNVRYELYPFYRTTITAPAPTPTPSGSVPPTPTNSSNSGGSSGISSGTIVAIVVPITVVVLLFIVGIWLLIKRAAKKRNSAQDPKTGTEISAAESLRFDFSTIEAATNKFSDANKLGEGGFGEVYKGLLPSGQEVAVKRLSKSSGQGGEEFKNEVEVVAKLQHRNLVRLLGFCLEGEEKILVYEFVANKSLDYILFDPERQRSLDWTRRYKIVKGIARGIQYLHEDSRLKIIHRDLKASNVLLDGDMNPKISDFGMARIFGVDQTQANTNRIVGTYGYMSPEYAMHGEYSARSDVYSFGVLILEIISGKKNSSFYETDVAEDLLSYAWKLWKDEVPLELMDHSLRESCTPNEVIRCIHIGLLCVQEDPADRPTMASVVLMLDSYTVTLPVPNQPAFFINSRTEPNMPKELKIDQSTTNSTTKSVNEMSVSEVDPR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0565 671 CDD STKc_IRAK 352 618 - -
Ssu7g0565 671 Gene3D Transferase(Phosphotransferase) domain 1 422 624 - -
Ssu7g0565 671 Pfam Salt stress response/antifungal 35 132 IPR002902 -
Ssu7g0565 671 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Ssu7g0565 671 SMART serkin_6 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0565 671 Gene3D - 140 246 IPR038408 -
Ssu7g0565 671 Gene3D - 27 135 IPR038408 -
Ssu7g0565 671 ProSiteProfiles Gnk2-homologous domain profile. 28 135 IPR002902 -
Ssu7g0565 671 MobiDBLite consensus disorder prediction 255 276 - -
Ssu7g0565 671 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Ssu7g0565 671 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Ssu7g0565 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 669 - -
Ssu7g0565 671 SUPERFAMILY Protein kinase-like (PK-like) 331 642 IPR011009 -
Ssu7g0565 671 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0565 671 MobiDBLite consensus disorder prediction 643 671 - -
Ssu7g0565 671 MobiDBLite consensus disorder prediction 645 664 - -
Ssu7g0565 671 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Ssu7g0565 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 669 - -
Ssu7g0565 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Ssu7g0565 671 Pfam Protein tyrosine and serine/threonine kinase 350 615 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0565 Ssu-Chr7 11363028 11366460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0565 9 671 Receptor kinase-like Gene Family AT4G05200 54.030 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu7g0565 PK_Tyr_Ser-Thr 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0565 - - gmx:100787420 1116.68