Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0555 ATGGATCCAAAGATCTCAGACTTCGGCACGGCAAGGATGATTGCTATAGATCAAGATCGAGGAAACACAAAAAGAGTAGTTGGAACATTTGGTTATATGTCTCCAGAATATATAAAACATGGTCAATTCTCAGAAAAATCAGATGTCTTCAGTTTTGGAGTCATTGTTTTGGAAGTCATCAGTGCAAAAAGGAATGCTCGTCCTCTTGTGTCACTAGATGATGATGACCTTTTGAGTTATGTTTGGCGACAATGGAGGGATCAAACaccattaaatatattagatcaAGATATTAAAGAATTTTGCAATCATAGTGAAGTTATTAAGTGCGTTCAAATTGGTTTATTATGTGCACAAGAGAAGCCAAATAATAGGCCTACCATGTCAAAAGTTGTTTCATATCTCTGTAGCCCTTTAACTGAGTTGCCATTTCCTGGAGAACCAACAAATTCTTACCATGGTGGAATAGTTCAAAACATGGTAGCAGGGGAGGCGAGTTCAAGTTCTGCATACTCAGTCAACGAAGTGTCCTTAAGTAAAATAATTCCTCGATAG 555 0.3676 MDPKISDFGTARMIAIDQDRGNTKRVVGTFGYMSPEYIKHGQFSEKSDVFSFGVIVLEVISAKRNARPLVSLDDDDLLSYVWRQWRDQTPLNILDQDIKEFCNHSEVIKCVQIGLLCAQEKPNNRPTMSKVVSYLCSPLTELPFPGEPTNSYHGGIVQNMVAGEASSSSAYSVNEVSLSKIIPR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0555 184 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 184 - -
Ssu7g0555 184 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Ssu7g0555 184 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
Ssu7g0555 184 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0555 184 SUPERFAMILY Protein kinase-like (PK-like) 2 148 IPR011009 -
Ssu7g0555 184 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0555 Ssu-Chr7 10809428 10810228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0555 1 184 Receptor kinase-like Gene Family AT4G11480 43.229 2.01e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu7g0555 PK_Tyr_Ser-Thr 1.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0555 - - lja:Lj0g3v0067799.1 267.314