Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0507 ATGGGACACTCCAACGTTTGGAACTCTCACCCCAAAAACTACGGTCCTGGTTCTCGCGCTTGCCGCGTGTGTGGGAACCCACATGGATTGATCAGGAAGTATGGCCTTATGTGCTGCAGGCAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAGAGTGATAGTGATACTAAATGCCGAAATGCCAGGCAGAGAAATATATGCTTGAATGACATTAGCACTGCCGCTGCAATCAATTTTTTGTTCGATGGCTGTTATTTGCTTTTGAAGGACTGGTAA 285 0.4667 MGHSNVWNSHPKNYGPGSRACRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKSDSDTKCRNARQRNICLNDISTAAAINFLFDGCYLLLKDW 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0507 94 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 IPR039744 GO:0003735|GO:0008270
Ssu7g0507 94 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Ssu7g0507 94 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 - -
Ssu7g0507 94 Hamap 30S ribosomal protein S14 type Z [rpsZ]. 2 57 IPR023676 GO:0003723|GO:0003735|GO:0006412|GO:0015935
Ssu7g0507 94 Pfam Ribosomal protein S14p/S29e 7 55 IPR001209 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0507 Ssu-Chr7 9411926 9413580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0507 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 6.43e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0507 K02980 - nnu:104600524 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3163 2 93890555 93891887 Ssu7g0507 7 9411926 9413580 PCT