Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0481 ATGATTAtcaaagaagatgaaacaaCTCTTACAACAGCCAAAGAACAAGCAGGTGAAGCGATGAACGGAGACAAGGACAATTACGGAAGCGAAGATGACAATCCCAAAGAGTGGTTGAACCTGAGCATAGGAGGCACTTCACTCTCAACAGCTGGAGACCCTGATTCACAATCAAGACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTCAGTTCACAAGCTTTAGGAGGTCATCAGAACGCCCACAAGAGGGAAAGGGGAGCTGCCAGAAGATACCAATCTCAGAGGTCGATGGCAATAATGGGCTTCTCCATGAACACAACTATGTTTCGATCACTTGGTGTCCAGCCCCATTCACTCGTGCACAAGCCATGCAGAGGTGGTACTATGGTGGCACCGAGCTTTCATGATGCACATGCAAGGCTTGGGATGGCGTGGACACCTTTCTCGTCTGAGGATCCAACGGATCTGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCACAACAGCCCCAGCCACCACAGGAGCCACTCAAGCTTGATTTGGACCTCAGACTCTGA 576 0.4878 MIIKEDETTLTTAKEQAGEAMNGDKDNYGSEDDNPKEWLNLSIGGTSLSTAGDPDSQSRPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTTMFRSLGVQPHSLVHKPCRGGTMVAPSFHDAHARLGMAWTPFSSEDPTDLVWPGSFRLVPQQPQPPQEPLKLDLDLRL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0481 191 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Ssu7g0481 191 Gene3D Classic Zinc Finger 53 114 - -
Ssu7g0481 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 191 - -
Ssu7g0481 191 MobiDBLite consensus disorder prediction 1 36 - -
Ssu7g0481 191 MobiDBLite consensus disorder prediction 19 33 - -
Ssu7g0481 191 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Ssu7g0481 191 MobiDBLite consensus disorder prediction 172 191 - -
Ssu7g0481 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 191 - -
Ssu7g0481 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0481 Ssu-Chr7 9000930 9001505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0481 53 179 C2H2 Transcription Factor Family AT1G24625 41.538 4.35e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0481 - - gmx:100811125 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0481 7 9000930 9001505 Ssu7g0481 7 9000930 9001505 ECH