Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0477 atggAGGCCAAAGAGGAATTCGAAGTGGACCATCTGACCACACCCACAGGGACCAGTTTCTCTCAGTTACTATTCGGagatgacgatgatgatgatgaaagtGCATTGGGTCTCGGTGTGGAATCTTACAATTACAACAACCTTACCCGTTCACCTCTTTTCTCCATTCACAAGGCACCCCAAATGCTATGTTTTGGCAACCATCAAAACGAAGGAGGAGACGTTTTGCTTGCTGAAACCAACGTCACCCCTCAGAAATCTGTCATCACTTCTAGTGACTCCTCTTCTGCTTCCTCCTGCAACTACGGCAACACGGGCTTCAATTCCTTATCTAAGTCTAATAGTTTGCAGAAAAAGCGAAATGGGTTGGGACAAGAAGCAGTGACCAAGGAAGGTGTTGGAGACCAGAGACAACCTAAGAAGACCAAAGCAGAGAACCCCACCTCAACTGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAACGAATTGGAGCGTTACAACAGCTTGTTTCTCCCTTTGGCAAGACAGATACAGCATCAGTGCTTCACGAGGCCATGGGCTATATAAGATTTCTACATGACCAAGTTCAGGTCCTGTGCTCTCCTTACCTGCAAAGTTTCCCTTCCTCATACCATCAACATCAACATGGGGAGGGAGATAACAATGAAGAGGAAGTGAACAAGGACTTGAGGAGTAGGGGTCTTTGCTTGATCCCTGTGGGATGCACCCTACACGTGGCAGGTAGCAATGGTGCTGATTTTTGGTCACCTGCTGCAATAGGGAACAATGTTTCACCATCAGCCAAGCAGTGA 813 0.4613 MEAKEEFEVDHLTTPTGTSFSQLLFGDDDDDDESALGLGVESYNYNNLTRSPLFSIHKAPQMLCFGNHQNEGGDVLLAETNVTPQKSVITSSDSSSASSCNYGNTGFNSLSKSNSLQKKRNGLGQEAVTKEGVGDQRQPKKTKAENPTSTGHAKRKEKLGERIGALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSFPSSYHQHQHGEGDNNEEEVNKDLRSRGLCLIPVGCTLHVAGSNGADFWSPAAIGNNVSPSAKQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0477 270 MobiDBLite consensus disorder prediction 133 158 - -
Ssu7g0477 270 Gene3D - 149 206 IPR036638 GO:0046983
Ssu7g0477 270 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 250 - -
Ssu7g0477 270 CDD bHLH_AtbHLH_like 154 199 IPR045239 -
Ssu7g0477 270 MobiDBLite consensus disorder prediction 111 158 - -
Ssu7g0477 270 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 58 250 - -
Ssu7g0477 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 204 IPR036638 GO:0046983
Ssu7g0477 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0477 Ssu-Chr7 8961879 8964050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0477 154 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.547 2.55e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0477 - - gmx:100809107 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0477 7 8961879 8964050 Ssu7g0477 7 8961879 8964050 ECH