Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0459 ATGAGCCTCAACTCCCAGAATCTCCATTTGTGGTGGAGACTTTCATCCTTGCTTCTTCTACTTCTTCAATCTGTTACATCTCTTAACTCAGATGGGGTTCTCTTGCTTAAATTCAAATACTCCATCCTCAGCGACCCACTATCAGTCTTAGATAGCTGGAACTACGATGATGCAACTCCATGTTCATGGCGTGGTGTTACATGCACTGACATTGGAGCCCCCCGTACCCCTGGCTTGTTCAGAGCAACTAGCTTGGTCCTTCCAGATAGCCAGCTTTTGGGGTCCGTTGCTGAAGACTTAGGCATGATCGAACACCTTCGCCACATCGATCTCTCCAACAATTTCCTCAACGGCTCTCTACCCAACATTATCTTCAACTCTTCCCAACTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCAGGTGAACTACCTGAACTGGTTGGTAAAATGACAAACCTTAAACTTCTCAACCTCTCTGACAATGCCTTTGCCGGGTTGATCCCAGAAAGCCTCCCCACTCTACCAAATTTAACCGTTGTTTCTCTGAAGAGTAACTACTTTTCTGGCAGTGTACCAACCGGGTTCAACTATGTGGAGATTTTGGATCTGTCCTCCAATTTGCTCAACGGCTCTTTGCCGGATGACTTTGGCGGTGAAAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATTTCGGGAACAATACCTCCAGCATTTGCGAAACAGTTTCCTGGAAACACAACAGTGGACCTCTCATTCAACAATCTGACGGGGCCAATACCAGGGTCTGAGGCTTTGCTCAACCAGAAGACAGAGTTTCTGTCAGGGAATGTTGATCTCTGTGGAAAGCCTCTGAAGATTCTTTGCACGGTTCCCTCTACTGCGTCCACTGCTCCACCCAATGTCACCACATCTTCACCAGCAATTGCAGTCATACCAAAAACAATTGACACAACCCCTTCAACAAACTCAACAGGAACCACCACCAGTTCTCAGAATGTATCACCAGGTGGCCTAAAACCTGCCGCCATAGCAGCAATTGTGGTAGGAGACCTAGCTGGCATGGCCCTTTTGGCCCTCATCATTCTCTTCATCTACCAACAGAGGAAAAAAAGACATCCAAATCCAAACCCAAAACCAAACACTAATGCTTCTGCTGCTGGCAACTCAGAAAACAAGGAGCAAACTATTGCAAGACAAGACGCGGATGTGAGAACTGTAACTCCCTCACTCCCTTGTTCCTGCTTAAcaatcaaagaagaagaaacttcAGAAGCGACAAGCTCTGACAGTGACCGAGAGAGCAACACCGCCGTGGACATCATCGCCGCGCAAAACGGGAACCTTCCGAAACAAGGCACTCTTGTGACCGTCGACGGGGAAACAAACTTGGAACTCGAGACCTTGCTTAAGGCTTCCGCATATATTTTGGGAAACAGCCACGTGAGCATTGTTTACAAGGCGGTGCTCGAGGATGGTAGAGCCTTTGCCGTTAGAAGGATCGGTCAATGTGGgattgagagaatgaaggaCTTCGAGAACCATGTGCGCGCGATTGCAAAGCTTCGCCATCCCAATTTGGTTAAGGTCCGTGGCTTCTGCTGGGGTCAAGATGATAAACTCCTAATATGTGACTATGTCCCCAATGGCAGCCTCGCCACCATAGATTACAGAAGAGCAGGTCCATCCCCTTTGAACTTGTCCTTGGAGGTGCGGTTGAAGATAGCAAAAGGGGTGGCACGAGGGTTGGCCTTCATTCACGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATCCTGTTAAACTCAGAAATGGAACCCGTCATAAGCGATTTTGGGCTGGACCGGCTCCTTTTGAATGACATCACCCCCAGAGCAAACGGTTCAGCTAGACAATTGACGGCGAACCAAAGAAGCCAACAAGACCTGCCATTTGGTTCAAGCCCCTACGCAGCAATGGGATCATCGTCTAGTACTGTGGGCCTAACGCCCTATCAAGCACCAGAGTCACTTCAAAGCATCAAACCCAGCAACAAATGGGACGTGTACTCTTTTGGGGTGGTCTTGCTTGAGCTTCTAACTGGGAGGGTTTTCTCGGACCGGGAGTTGGACCAGTGGCATGAACCGGGTTCGGTGGAAGAGGAGAGGAACCGGGTCTTAAGAATGGCTGACGTGGCAATAAAGTCTGAGCTGGAAGGGAGAGAAAATGTGGTGTTGCCGTGCTTCAAGCTGGGACTTGGCTGTGCTTGTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGCTTCTTCCGTTAATTAA 2337 0.478 MSLNSQNLHLWWRLSSLLLLLLQSVTSLNSDGVLLLKFKYSILSDPLSVLDSWNYDDATPCSWRGVTCTDIGAPRTPGLFRATSLVLPDSQLLGSVAEDLGMIEHLRHIDLSNNFLNGSLPNIIFNSSQLQVLSLSNNVISGELPELVGKMTNLKLLNLSDNAFAGLIPESLPTLPNLTVVSLKSNYFSGSVPTGFNYVEILDLSSNLLNGSLPDDFGGESLRYLNLSYNKISGTIPPAFAKQFPGNTTVDLSFNNLTGPIPGSEALLNQKTEFLSGNVDLCGKPLKILCTVPSTASTAPPNVTTSSPAIAVIPKTIDTTPSTNSTGTTTSSQNVSPGGLKPAAIAAIVVGDLAGMALLALIILFIYQQRKKRHPNPNPKPNTNASAAGNSENKEQTIARQDADVRTVTPSLPCSCLTIKEEETSEATSSDSDRESNTAVDIIAAQNGNLPKQGTLVTVDGETNLELETLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGQCGIERMKDFENHVRAIAKLRHPNLVKVRGFCWGQDDKLLICDYVPNGSLATIDYRRAGPSPLNLSLEVRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPVISDFGLDRLLLNDITPRANGSARQLTANQRSQQDLPFGSSPYAAMGSSSSTVGLTPYQAPESLQSIKPSNKWDVYSFGVVLLELLTGRVFSDRELDQWHEPGSVEEERNRVLRMADVAIKSELEGRENVVLPCFKLGLGCACLVPQKRPSMKEALQILDKIPASSVN 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0459 778 Gene3D Ribonuclease Inhibitor 198 292 IPR032675 -
Ssu7g0459 778 Pfam Leucine rich repeat 176 232 IPR001611 GO:0005515
Ssu7g0459 778 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Ssu7g0459 778 CDD TM_EGFR-like 344 374 - -
Ssu7g0459 778 PANTHER OS04G0122200 PROTEIN 23 776 - -
Ssu7g0459 778 MobiDBLite consensus disorder prediction 632 651 - -
Ssu7g0459 778 ProSiteProfiles Protein kinase domain profile. 472 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0459 778 Pfam Protein kinase domain 477 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0459 778 SUPERFAMILY Protein kinase-like (PK-like) 477 769 IPR011009 -
Ssu7g0459 778 Pfam Leucine Rich repeats (2 copies) 129 165 IPR025875 -
Ssu7g0459 778 Gene3D Transferase(Phosphotransferase) domain 1 548 777 - -
Ssu7g0459 778 MobiDBLite consensus disorder prediction 314 337 - -
Ssu7g0459 778 MobiDBLite consensus disorder prediction 372 400 - -
Ssu7g0459 778 Gene3D Ribonuclease Inhibitor 28 197 IPR032675 -
Ssu7g0459 778 Gene3D Phosphorylase Kinase; domain 1 452 547 - -
Ssu7g0459 778 MobiDBLite consensus disorder prediction 378 396 - -
Ssu7g0459 778 SUPERFAMILY L domain-like 31 288 - -
Ssu7g0459 778 Pfam Leucine Rich Repeat 105 123 IPR001611 GO:0005515
Ssu7g0459 778 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 23 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0459 Ssu-Chr7 8721662 8724355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0459 14 777 Receptor kinase-like Gene Family AT4G37250 50.193 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ssu7g0459 Pkinase 2.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0459 - - gmx:100820334 1221.45