Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g0459 | ATGAGCCTCAACTCCCAGAATCTCCATTTGTGGTGGAGACTTTCATCCTTGCTTCTTCTACTTCTTCAATCTGTTACATCTCTTAACTCAGATGGGGTTCTCTTGCTTAAATTCAAATACTCCATCCTCAGCGACCCACTATCAGTCTTAGATAGCTGGAACTACGATGATGCAACTCCATGTTCATGGCGTGGTGTTACATGCACTGACATTGGAGCCCCCCGTACCCCTGGCTTGTTCAGAGCAACTAGCTTGGTCCTTCCAGATAGCCAGCTTTTGGGGTCCGTTGCTGAAGACTTAGGCATGATCGAACACCTTCGCCACATCGATCTCTCCAACAATTTCCTCAACGGCTCTCTACCCAACATTATCTTCAACTCTTCCCAACTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCAGGTGAACTACCTGAACTGGTTGGTAAAATGACAAACCTTAAACTTCTCAACCTCTCTGACAATGCCTTTGCCGGGTTGATCCCAGAAAGCCTCCCCACTCTACCAAATTTAACCGTTGTTTCTCTGAAGAGTAACTACTTTTCTGGCAGTGTACCAACCGGGTTCAACTATGTGGAGATTTTGGATCTGTCCTCCAATTTGCTCAACGGCTCTTTGCCGGATGACTTTGGCGGTGAAAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATTTCGGGAACAATACCTCCAGCATTTGCGAAACAGTTTCCTGGAAACACAACAGTGGACCTCTCATTCAACAATCTGACGGGGCCAATACCAGGGTCTGAGGCTTTGCTCAACCAGAAGACAGAGTTTCTGTCAGGGAATGTTGATCTCTGTGGAAAGCCTCTGAAGATTCTTTGCACGGTTCCCTCTACTGCGTCCACTGCTCCACCCAATGTCACCACATCTTCACCAGCAATTGCAGTCATACCAAAAACAATTGACACAACCCCTTCAACAAACTCAACAGGAACCACCACCAGTTCTCAGAATGTATCACCAGGTGGCCTAAAACCTGCCGCCATAGCAGCAATTGTGGTAGGAGACCTAGCTGGCATGGCCCTTTTGGCCCTCATCATTCTCTTCATCTACCAACAGAGGAAAAAAAGACATCCAAATCCAAACCCAAAACCAAACACTAATGCTTCTGCTGCTGGCAACTCAGAAAACAAGGAGCAAACTATTGCAAGACAAGACGCGGATGTGAGAACTGTAACTCCCTCACTCCCTTGTTCCTGCTTAAcaatcaaagaagaagaaacttcAGAAGCGACAAGCTCTGACAGTGACCGAGAGAGCAACACCGCCGTGGACATCATCGCCGCGCAAAACGGGAACCTTCCGAAACAAGGCACTCTTGTGACCGTCGACGGGGAAACAAACTTGGAACTCGAGACCTTGCTTAAGGCTTCCGCATATATTTTGGGAAACAGCCACGTGAGCATTGTTTACAAGGCGGTGCTCGAGGATGGTAGAGCCTTTGCCGTTAGAAGGATCGGTCAATGTGGgattgagagaatgaaggaCTTCGAGAACCATGTGCGCGCGATTGCAAAGCTTCGCCATCCCAATTTGGTTAAGGTCCGTGGCTTCTGCTGGGGTCAAGATGATAAACTCCTAATATGTGACTATGTCCCCAATGGCAGCCTCGCCACCATAGATTACAGAAGAGCAGGTCCATCCCCTTTGAACTTGTCCTTGGAGGTGCGGTTGAAGATAGCAAAAGGGGTGGCACGAGGGTTGGCCTTCATTCACGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATCCTGTTAAACTCAGAAATGGAACCCGTCATAAGCGATTTTGGGCTGGACCGGCTCCTTTTGAATGACATCACCCCCAGAGCAAACGGTTCAGCTAGACAATTGACGGCGAACCAAAGAAGCCAACAAGACCTGCCATTTGGTTCAAGCCCCTACGCAGCAATGGGATCATCGTCTAGTACTGTGGGCCTAACGCCCTATCAAGCACCAGAGTCACTTCAAAGCATCAAACCCAGCAACAAATGGGACGTGTACTCTTTTGGGGTGGTCTTGCTTGAGCTTCTAACTGGGAGGGTTTTCTCGGACCGGGAGTTGGACCAGTGGCATGAACCGGGTTCGGTGGAAGAGGAGAGGAACCGGGTCTTAAGAATGGCTGACGTGGCAATAAAGTCTGAGCTGGAAGGGAGAGAAAATGTGGTGTTGCCGTGCTTCAAGCTGGGACTTGGCTGTGCTTGTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGCTTCTTCCGTTAATTAA | 2337 | 0.478 | MSLNSQNLHLWWRLSSLLLLLLQSVTSLNSDGVLLLKFKYSILSDPLSVLDSWNYDDATPCSWRGVTCTDIGAPRTPGLFRATSLVLPDSQLLGSVAEDLGMIEHLRHIDLSNNFLNGSLPNIIFNSSQLQVLSLSNNVISGELPELVGKMTNLKLLNLSDNAFAGLIPESLPTLPNLTVVSLKSNYFSGSVPTGFNYVEILDLSSNLLNGSLPDDFGGESLRYLNLSYNKISGTIPPAFAKQFPGNTTVDLSFNNLTGPIPGSEALLNQKTEFLSGNVDLCGKPLKILCTVPSTASTAPPNVTTSSPAIAVIPKTIDTTPSTNSTGTTTSSQNVSPGGLKPAAIAAIVVGDLAGMALLALIILFIYQQRKKRHPNPNPKPNTNASAAGNSENKEQTIARQDADVRTVTPSLPCSCLTIKEEETSEATSSDSDRESNTAVDIIAAQNGNLPKQGTLVTVDGETNLELETLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGQCGIERMKDFENHVRAIAKLRHPNLVKVRGFCWGQDDKLLICDYVPNGSLATIDYRRAGPSPLNLSLEVRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPVISDFGLDRLLLNDITPRANGSARQLTANQRSQQDLPFGSSPYAAMGSSSSTVGLTPYQAPESLQSIKPSNKWDVYSFGVVLLELLTGRVFSDRELDQWHEPGSVEEERNRVLRMADVAIKSELEGRENVVLPCFKLGLGCACLVPQKRPSMKEALQILDKIPASSVN | 778 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g0459 | 778 | Gene3D | Ribonuclease Inhibitor | 198 | 292 | IPR032675 | - | |
Ssu7g0459 | 778 | Pfam | Leucine rich repeat | 176 | 232 | IPR001611 | GO:0005515 | |
Ssu7g0459 | 778 | Pfam | Leucine rich repeat N-terminal domain | 29 | 68 | IPR013210 | - | |
Ssu7g0459 | 778 | CDD | TM_EGFR-like | 344 | 374 | - | - | |
Ssu7g0459 | 778 | PANTHER | OS04G0122200 PROTEIN | 23 | 776 | - | - | |
Ssu7g0459 | 778 | MobiDBLite | consensus disorder prediction | 632 | 651 | - | - | |
Ssu7g0459 | 778 | ProSiteProfiles | Protein kinase domain profile. | 472 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0459 | 778 | Pfam | Protein kinase domain | 477 | 767 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0459 | 778 | SUPERFAMILY | Protein kinase-like (PK-like) | 477 | 769 | IPR011009 | - | |
Ssu7g0459 | 778 | Pfam | Leucine Rich repeats (2 copies) | 129 | 165 | IPR025875 | - | |
Ssu7g0459 | 778 | Gene3D | Transferase(Phosphotransferase) domain 1 | 548 | 777 | - | - | |
Ssu7g0459 | 778 | MobiDBLite | consensus disorder prediction | 314 | 337 | - | - | |
Ssu7g0459 | 778 | MobiDBLite | consensus disorder prediction | 372 | 400 | - | - | |
Ssu7g0459 | 778 | Gene3D | Ribonuclease Inhibitor | 28 | 197 | IPR032675 | - | |
Ssu7g0459 | 778 | Gene3D | Phosphorylase Kinase; domain 1 | 452 | 547 | - | - | |
Ssu7g0459 | 778 | MobiDBLite | consensus disorder prediction | 378 | 396 | - | - | |
Ssu7g0459 | 778 | SUPERFAMILY | L domain-like | 31 | 288 | - | - | |
Ssu7g0459 | 778 | Pfam | Leucine Rich Repeat | 105 | 123 | IPR001611 | GO:0005515 | |
Ssu7g0459 | 778 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 23 | 776 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g0459 | Ssu-Chr7 | 8721662 | 8724355 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g0459 | 14 | 777 | Receptor kinase-like Gene Family | AT4G37250 | 50.193 | 0.0 | 700 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Ssu7g0459 | Pkinase | 2.5e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g0459 | - | - | gmx:100820334 | 1221.45 |