Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0453 atgggtagCCTTGAAGCGGAAAGAACAACAGTAGGATGGGCAGCAAGAGACCCTTCAGGGATTCTCTCCCCATACACCTTCACTCTAAGagaCACTGGCCCTGATgatgtttatataaaagttcACTACTGTGGAATTTGCCATTCTGATCTCCACCAGATTAAAAACGATCTTGGCATGTCCAATTATCCCATGGTTCCGGGACATGAGGTGGTGGGCGAGGTACTCGAGGTGGGGTCAAATGTTAGCAGGTTCCGAGTGGGAGAACTGGTTGGTGTTGGACTCCTCGTAGGTTGCTGCAAAAACTGCGGGCCATGCCAATCAGACATTGAGCAATATTGCAGCAAGAAAATCTGGTCTTACAATGATGTTTATATCGATGGAAAGCCCACACAGGGTGGTTTTGCGGAAACCATTATCGTTGAGCAAaaGTTTGTGGCGAAAATTCCAGAGGGTTTGGCGCCAGAGCAAGTGGCACCGTTGTTGTGTGCGGGTGTCACAGTGTACAGTCCACTGGCACACTTTGGGCTGAAAGGGAGTGGGCTGAGGGGTGGAATATTGGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATAGCAAAGGCACTGGGTCACCATGTGACTGTGATAAGCTCTTCTGACAAGAAGAAACAGGAGGCCCTTGAACACCTTGGAGCTGACCAATATCTTGTTAGCTCTGATGCCCCTGCCATGCAGGAAGCTGCTGATTCCCTTGACTACATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTCTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGTGTCATAAACACTCCACTGCAATTTGTTAGCCCCATGGTGATGCTAGGGAGGAAATCAATCACGGGAAGCTTCATTGGGAGCATGAAGGAGACAGAGGAGATGTTGGCGTTCTGGAAAGAGAAGGGTCTGAGTTCTATGATTGAAATCGTAAATATTGATTACATTAACAAAGCCTTTGAAAGGTTGGAGAAGAACGATGTGAGATATAGGTTTGTTGTGGATGTCAAAGGCAGCAAACTTGATCAGTAA 1074 0.4683 MGSLEAERTTVGWAARDPSGILSPYTFTLRDTGPDDVYIKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVSRFRVGELVGVGLLVGCCKNCGPCQSDIEQYCSKKIWSYNDVYIDGKPTQGGFAETIIVEQKFVAKIPEGLAPEQVAPLLCAGVTVYSPLAHFGLKGSGLRGGILGLGGVGHMGVKIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDAPAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLAFWKEKGLSSMIEIVNIDYINKAFERLEKNDVRYRFVVDVKGSKLDQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0453 357 CDD CAD1 11 349 - -
Ssu7g0453 357 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Ssu7g0453 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Ssu7g0453 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Ssu7g0453 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Ssu7g0453 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Ssu7g0453 357 Gene3D - 164 320 - -
Ssu7g0453 357 PANTHER ALDEHYDE REDUCTASE 4 357 - -
Ssu7g0453 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 318 IPR036291 -
Ssu7g0453 357 Gene3D - 13 350 - -
Ssu7g0453 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0453 Ssu-Chr7 8673065 8675406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0453 1 355 Monolignol Biosynthesis Gene Families AT3G19450 79.213 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0453 K00083 - gmx:100777558 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0453 7 8673065 8675406 Ssu7g0453 7 8673065 8675406 ECH