Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu7g0441 | ATGCTTAAAGTCAATGCTCACTATGGATTCTCTGCTCTCACTGCAACACTGGCCGTTACTTACCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGGGAGAAGCCTTGGACGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCTGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTGCAAGACACAAAGTATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGCATGTGCTGTCCACCCTCAAATGGAAGATGCACCCCGTGACCCCTCTCTCGTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTCATCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTCTGGCTGTGTTTTTAGATTCAAGATTTGTTGGGTGTCTTCCTTCCGTTCTGGCCACTGCAACAATGCTGCATGTTATAGACCAGATTGAGCACACTGGTGGGATGGAATACAAAAATCAGCTTCTTAGTGTTCTCAAAATTAACAAGGAGAAAGTAGATGAATGTTATAATGGCATTCTCCAACTCTCAAATGCCAATAATTATGCTCATGACAACGCTAGCAAGCGCAAGTATGAGCAAATCCCAGGCAGCCCAAGTGGCGTAATTGATGCTGCTTTTAGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCACCACCGGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAAATTGTCACCACTTAACCGGGTCATTGTCGGAATTGTTGGCACCTCTCCTTAA | 813 | 0.449 | MLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWTIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELHVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLAVFLDSRFVGCLPSVLATATMLHVIDQIEHTGGMEYKNQLLSVLKINKEKVDECYNGILQLSNANNYAHDNASKRKYEQIPGSPSGVIDAAFSSDGSNDSWAVGSSLYSPPEPLFKKSRTQGQQMKLSPLNRVIVGIVGTSP | 270 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu7g0441 | 270 | Gene3D | - | 1 | 94 | - | - | |
| Ssu7g0441 | 270 | SUPERFAMILY | Cyclin-like | 97 | 206 | IPR036915 | - | |
| Ssu7g0441 | 270 | Pfam | Cyclin, N-terminal domain | 1 | 93 | IPR006671 | - | |
| Ssu7g0441 | 270 | Pfam | Cyclin, C-terminal domain | 96 | 207 | IPR004367 | - | |
| Ssu7g0441 | 270 | SUPERFAMILY | Cyclin-like | 1 | 94 | IPR036915 | - | |
| Ssu7g0441 | 270 | CDD | CYCLIN | 1 | 86 | IPR013763 | - | |
| Ssu7g0441 | 270 | PANTHER | CYCLINS | 1 | 246 | IPR039361 | - | |
| Ssu7g0441 | 270 | SMART | cyclin_7 | 1 | 87 | IPR013763 | - | |
| Ssu7g0441 | 270 | Gene3D | - | 95 | 184 | - | - | |
| Ssu7g0441 | 270 | PANTHER | CYCLIN D3.1 PROTEIN | 1 | 246 | - | - | |
| Ssu7g0441 | 270 | SMART | Cyclin_C_2 | 96 | 224 | IPR004367 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu7g0441 | Ssu-Chr7 | 8356897 | 8358134 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu7g0441 | 1 | 260 | Core Cell Cycle Gene Families | AT5G67260 | 53.008 | 2.21e-90 | 271 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu7g0441 | K14505 | - | gmx:547740 | 502.286 |
Event-related genes