Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0436 atggATTCAGTGCCTGCTGATGTGTCCAATTCACATCCTATTAAAGATCCAGCCACTTCACCTCCTGCTAAAGAGACTGATGGACAAGCTTCTGCTGCTGTAGTCTCTGGGCAAGACAATTCTGCACGTGAGGCACCATCAAGGCTATCTCCCACTGGCATATCGTCTTGGGctaaaaacttgaaaatttctCAGCCATTTTCTGGCTCCCAAGATGACTCATCAAGTGGAAATGTTGGGAAATCAACTTTTGCACGCATCACTAGTAATTTGGGATTGAGGTTGTCCCCAAAATCTCCTGTAGTAGATGACAGTTCCAATGAAACAGCTGTACAATCTAATTTGTTTGGAACTATTACGAAAGGCCTGGTTGACTCTTCTAAGAATGCAGTGAAAGCTGTGCAGGTTAAGGCACGCCATGTTGTTTCACAGAATAAACGCAGATACCAGGAAGGAGGTTTTGATTTAGACATGACATATATCACTGAAAACGTTATTGCAATGGGATTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGCTATGTTGAAGGATTTTACAGAAATCATATGgaagaagtgattaagtttTTTGAAACTCAACATAAGGGTAAATACAAAGTTTATAATCTTTGTTCTGAGCGGTTGTATGATGCATCATTGTTTGAGGGGAAGgTGGCTAGCTTCCCATTTGATGATCACAATTGCCCACCAATTCAACTGATTATATCATTCTGTCAAAGTGCTTACTCGTGGTTGAAAGAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAATCGATGGATTACTATAATCAGAAAAGATGTGTTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGAGTCTTGACTTACTTTAATGGCGAAAACCCACCTGCCCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTATAACTGTCTCAGATCATAGTGGTGTGTTGTTCTCAACCAAGAAGCATCCGAGAACCAAGGATCTTTTGCCAGAAGATTTTTGGTTTAGTGCACCAAAGAAGGGGGTGATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAGTTGGTTGGGGACTTCAAAATCCATTTTCATGATCGCCAAGGAGATTTTTACtgTTGGTTGAACACAACTATGACAGAAAATAGGAAGGTATTGAACACCAGTGATCTCGATGGCTTTGACAAGAGAAAATTGCCTTCTCCAGGATTTATGGTTGAGGTTGTGCTCGTGGATTATAACGGCAATGTTGTTACTTCCAAACCTGAAACTACTACACAGAAATCAGATGAGAGTTCAAGTAACAGTCCTGCCAGTCCTGCCCCGTGGAAAGGAGCACCCCTGCACCGAATGCAGACAAAAAATTAG 1509 0.4162 MDSVPADVSNSHPIKDPATSPPAKETDGQASAAVVSGQDNSAREAPSRLSPTGISSWAKNLKISQPFSGSQDDSSSGNVGKSTFARITSNLGLRLSPKSPVVDDSSNETAVQSNLFGTITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENVIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETQHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDKRKLPSPGFMVEVVLVDYNGNVVTSKPETTTQKSDESSSNSPASPAPWKGAPLHRMQTKN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0436 502 MobiDBLite consensus disorder prediction 31 54 - -
Ssu7g0436 502 MobiDBLite consensus disorder prediction 466 487 - -
Ssu7g0436 502 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Ssu7g0436 502 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Ssu7g0436 502 MobiDBLite consensus disorder prediction 466 502 - -
Ssu7g0436 502 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Ssu7g0436 502 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 18 486 - -
Ssu7g0436 502 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Ssu7g0436 502 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 240 300 IPR000387 GO:0016311|GO:0016791
Ssu7g0436 502 MobiDBLite consensus disorder prediction 1 54 - -
Ssu7g0436 502 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Ssu7g0436 502 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Ssu7g0436 502 SMART PTEN_C2_2 331 459 IPR014020 -
Ssu7g0436 502 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 18 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0436 Ssu-Chr7 8242467 8255125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0436 33 487 Protein tyrosine phosphatase (PTP) family AT3G19420 79.258 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0436 K01110 - gmx:100784003 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0436 7 8242467 8255125 Ssu7g0436 7 8242467 8255125 ECH
Ssu2g2526 2 84187465 84194514 Ssu7g0436 7 8242467 8255125 PCT