Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0375 ATGTTGAAGCTCCACCCCTTTAACCCACAAGCCCCAAGCTCAAATTTTGACAATGACTCACCATACAAAACCACAAAACACCTAACCACCGCAAAAAAGCTCCTCCAAGTCATTCTCACCGACTACGATGCCACCAACTCGAACTACTCCGGCGATGATGAGGACCCACAAAACCCACCAAAACACCGAAAAGAAAATACCCAAATCACCAGAAACCTTCCTTTCTCCTCAGAACCCTTAACACAACCTTCACCTTCCTCGTCACCAAAGTCTGTTCCGAAGCGTTCGTGGGGACGATGGACCATCGAGATTCGTGACCCGACCTTTCGAACACAGGTATGGCTCGACACCTTTGACACAGTGGAGGAAGTTGCCACCATGAAGCTCAAGGGCTCCAAACACTATCACCAACTTCCCCCTCATTGCTGTCGGGAAAACAAAAGACTGGATTGTGTAGCCAAAAAGAGATGCGAGATGCAATATGtggtgttttttttaaaaagaaatgggtCACAAATCGTACAAACAAAGGGTGTTACAATAGATTTTGATAAGTATTTCAACAACATCTGA 573 0.4415 MLKLHPFNPQAPSSNFDNDSPYKTTKHLTTAKKLLQVILTDYDATNSNYSGDDEDPQNPPKHRKENTQITRNLPFSSEPLTQPSPSSSPKSVPKRSWGRWTIEIRDPTFRTQVWLDTFDTVEEVATMKLKGSKHYHQLPPHCCRENKRLDCVAKKRCEMQYVVFFLKRNGSQIVQTKGVTIDFDKYFNNI 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0375 190 MobiDBLite consensus disorder prediction 8 23 - -
Ssu7g0375 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 32 126 - -
Ssu7g0375 190 SUPERFAMILY DNA-binding domain 92 128 IPR016177 GO:0003677
Ssu7g0375 190 MobiDBLite consensus disorder prediction 69 94 - -
Ssu7g0375 190 ProSiteProfiles AP2/ERF domain profile. 88 125 IPR001471 GO:0003700|GO:0006355
Ssu7g0375 190 Gene3D AP2/ERF domain 90 135 IPR036955 GO:0003700|GO:0006355
Ssu7g0375 190 MobiDBLite consensus disorder prediction 1 23 - -
Ssu7g0375 190 MobiDBLite consensus disorder prediction 44 96 - -
Ssu7g0375 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF120-RELATED 32 126 - -
Ssu7g0375 190 SMART rav1_2 92 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0375 Ssu-Chr7 6688174 6689009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0375 90 170 AP2-EREBP Transcription Factor Family AT4G11140 36.782 5.91e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0375 - K13434 gmx:100794593 125.946