Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0347 ATGGCGGCAGCACTCATTGCTCGCGTCACGGtttccattttcttcttctcctggTTCAATGTTCACGAACCCAGACTTCGACGCCCTGGTGGCCTTCAAACCGCTTCAGACGCGTCCCGAAATCTCGCAACATGGAACAACAGCACGAACCCGTGTTCCTGGAGCGGCGTGTCGTGCATTCGAGACCGAGTCTCGCGGCTCGTTCTCGAAAACCTCGACCTCCAAGGTTCCATTCACGCCTTAACTTCCCTCACTCACCTCCGAGTTCTGAGTCTCAAAGGGAACCGTTTCTCCGGTTCTGTTCCCAACCTCTCCAACCTCGCTTCCCTGAAGCTTCTCTTCCTGTCTCGCAACCAGTTCTCCGGCGAGTTCCCGGCGACCGTCACGTCGCTCTTCCACCTCTACCGCCTCGATCTGTCCAACAACAACTTCTCCGGCGAGATTCCGGCGACTCTCACCCACCTGACCCACCTCCTCACTCTCCGCCTCGACGGGAACAACTTCTCCGGCCACATTCCCGACGTGAACCTGCCCACCCTGCAAGAGTTCAACGTCTCCGGCAACGGACTCTCCGGCGAGATACCCAAGGCGTTGTCAAGTTTCCCCGAATCCTCGTTCGGACGAAACCCGTTTCTCTGCGGAGCCCCAATCAAAAAATGCTCATCCGACCCGACCAAACCGGGGTCCGAAGGCGCCATTGCTTCACCACTGTTGCCACAAAACAACCACCCGACAACCACTGTATCATCTTCCCCAGTTCAATGCCAAAAACACCAACATCAAGTGGAGGGGAAGGGGTCGAAGCTGTTTGAGAGTGAGAAGATTGTTTATTCGTCGAGTCCGTACCCTGCTCAGGGAGGGTTCGAGAGGGGTCGAATGGTGTTCTTCGAGGGGGAGAAAAGGTTTGAGCTTGAGGACCTGTTGCGAGCCTCTGCGGAAATGCTCGGAAAGGGTGGGTTCGGGACCGCGTACAAAGCGGTGCTTGATGATGGCAATGTGGTTGCGGTGAAGAGACTCAAGGACGCGCAGATAACGGGGAAGAGAGAGTTCGAGCAGCACATGGAGGTGTTGGGAAGGTTGAGACATCCCAACGTTGTTAGCTTGAGGGCTTACTATTTCGCGCGCGAGGAGAAGTTGTTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGGGGACCCGGACGAACCCCACTGGACTGGACCACGCGGCTCAAGATAGCAGCGGGAGCGGCACGAGGCGTGGCTTTCATTCATAACTCGTGCAAGTCCCTTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCATGGAAACGCGCGGGTCTCGGATTTTGGGCTCTCGGTCTTCGCGGGCCCGGGCCCAGTGGGCGGGAGATCCAACGGCTACCGCGCGCCGGAGGCATCGGACGGCCGAAAACAGTCCCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTGCTGGAGCTGCTCACGGGGAAGTGCCCCTCCGTGGTCGAGAGTGCAGGGAGTGCCTACGGTGGGGTCGTGGACCTACCGAGGTGGGTCCAGTCAGTGGTGAGGGAGGAGTGGACCGCTGAGGTGTTTGATCTGGAGCTGATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGGCTGCTTCAGATTGCAATGGCGTGTACCGCGGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTCGTCAAGATGATCGAGGAGTTGCGTGGGGTCGAGGTGTCGCCGTGTCATGACACGTTGGATTCGGTATCTGAGTCACCTTCCTTGTCTGAAGATGCGTGTGGAACGAGTCAGGGAAGTGAAATAAGGGACCAGAGTACTAGGTGCGAACTTCCTAGCAAACAGAAAGCAAACATTGATGCTGTCTCCGTTATACTTGCATTTCTTATCCCTTAA 1947 0.5598 MAAALIARVTVSIFFFSWFNVHEPRLRRPGGLQTASDASRNLATWNNSTNPCSWSGVSCIRDRVSRLVLENLDLQGSIHALTSLTHLRVLSLKGNRFSGSVPNLSNLASLKLLFLSRNQFSGEFPATVTSLFHLYRLDLSNNNFSGEIPATLTHLTHLLTLRLDGNNFSGHIPDVNLPTLQEFNVSGNGLSGEIPKALSSFPESSFGRNPFLCGAPIKKCSSDPTKPGSEGAIASPLLPQNNHPTTTVSSSPVQCQKHQHQVEGKGSKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMEVLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNVLLDKHGNARVSDFGLSVFAGPGPVGGRSNGYRAPEASDGRKQSQKSDVYSFGVLLLELLTGKCPSVVESAGSAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMACTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDTLDSVSESPSLSEDACGTSQGSEIRDQSTRCELPSKQKANIDAVSVILAFLIP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0347 648 Gene3D Phosphorylase Kinase; domain 1 289 384 - -
Ssu7g0347 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 255 601 - -
Ssu7g0347 648 MobiDBLite consensus disorder prediction 235 252 - -
Ssu7g0347 648 SUPERFAMILY L domain-like 42 218 - -
Ssu7g0347 648 Pfam Protein kinase domain 313 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0347 648 ProSiteProfiles Leucine-rich repeat profile. 86 108 IPR001611 GO:0005515
Ssu7g0347 648 SUPERFAMILY Protein kinase-like (PK-like) 313 582 IPR011009 -
Ssu7g0347 648 CDD STKc_IRAK 315 585 - -
Ssu7g0347 648 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Ssu7g0347 648 Gene3D Transferase(Phosphotransferase) domain 1 385 598 - -
Ssu7g0347 648 Pfam Leucine rich repeat N-terminal domain 37 59 IPR013210 -
Ssu7g0347 648 MobiDBLite consensus disorder prediction 224 252 - -
Ssu7g0347 648 PANTHER - 255 601 - -
Ssu7g0347 648 PANTHER - 31 225 - -
Ssu7g0347 648 ProSiteProfiles Protein kinase domain profile. 309 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0347 648 MobiDBLite consensus disorder prediction 598 620 - -
Ssu7g0347 648 Gene3D Ribonuclease Inhibitor 32 82 IPR032675 -
Ssu7g0347 648 Gene3D Ribonuclease Inhibitor 83 227 IPR032675 -
Ssu7g0347 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 31 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0347 Ssu-Chr7 6183829 6187498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0347 32 615 Receptor kinase-like Gene Family AT1G68400 65.991 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ssu7g0347 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0347 - - gmx:100779158 1026.54