Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g0347 | ATGGCGGCAGCACTCATTGCTCGCGTCACGGtttccattttcttcttctcctggTTCAATGTTCACGAACCCAGACTTCGACGCCCTGGTGGCCTTCAAACCGCTTCAGACGCGTCCCGAAATCTCGCAACATGGAACAACAGCACGAACCCGTGTTCCTGGAGCGGCGTGTCGTGCATTCGAGACCGAGTCTCGCGGCTCGTTCTCGAAAACCTCGACCTCCAAGGTTCCATTCACGCCTTAACTTCCCTCACTCACCTCCGAGTTCTGAGTCTCAAAGGGAACCGTTTCTCCGGTTCTGTTCCCAACCTCTCCAACCTCGCTTCCCTGAAGCTTCTCTTCCTGTCTCGCAACCAGTTCTCCGGCGAGTTCCCGGCGACCGTCACGTCGCTCTTCCACCTCTACCGCCTCGATCTGTCCAACAACAACTTCTCCGGCGAGATTCCGGCGACTCTCACCCACCTGACCCACCTCCTCACTCTCCGCCTCGACGGGAACAACTTCTCCGGCCACATTCCCGACGTGAACCTGCCCACCCTGCAAGAGTTCAACGTCTCCGGCAACGGACTCTCCGGCGAGATACCCAAGGCGTTGTCAAGTTTCCCCGAATCCTCGTTCGGACGAAACCCGTTTCTCTGCGGAGCCCCAATCAAAAAATGCTCATCCGACCCGACCAAACCGGGGTCCGAAGGCGCCATTGCTTCACCACTGTTGCCACAAAACAACCACCCGACAACCACTGTATCATCTTCCCCAGTTCAATGCCAAAAACACCAACATCAAGTGGAGGGGAAGGGGTCGAAGCTGTTTGAGAGTGAGAAGATTGTTTATTCGTCGAGTCCGTACCCTGCTCAGGGAGGGTTCGAGAGGGGTCGAATGGTGTTCTTCGAGGGGGAGAAAAGGTTTGAGCTTGAGGACCTGTTGCGAGCCTCTGCGGAAATGCTCGGAAAGGGTGGGTTCGGGACCGCGTACAAAGCGGTGCTTGATGATGGCAATGTGGTTGCGGTGAAGAGACTCAAGGACGCGCAGATAACGGGGAAGAGAGAGTTCGAGCAGCACATGGAGGTGTTGGGAAGGTTGAGACATCCCAACGTTGTTAGCTTGAGGGCTTACTATTTCGCGCGCGAGGAGAAGTTGTTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGGGGACCCGGACGAACCCCACTGGACTGGACCACGCGGCTCAAGATAGCAGCGGGAGCGGCACGAGGCGTGGCTTTCATTCATAACTCGTGCAAGTCCCTTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCATGGAAACGCGCGGGTCTCGGATTTTGGGCTCTCGGTCTTCGCGGGCCCGGGCCCAGTGGGCGGGAGATCCAACGGCTACCGCGCGCCGGAGGCATCGGACGGCCGAAAACAGTCCCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTGCTGGAGCTGCTCACGGGGAAGTGCCCCTCCGTGGTCGAGAGTGCAGGGAGTGCCTACGGTGGGGTCGTGGACCTACCGAGGTGGGTCCAGTCAGTGGTGAGGGAGGAGTGGACCGCTGAGGTGTTTGATCTGGAGCTGATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGGCTGCTTCAGATTGCAATGGCGTGTACCGCGGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTCGTCAAGATGATCGAGGAGTTGCGTGGGGTCGAGGTGTCGCCGTGTCATGACACGTTGGATTCGGTATCTGAGTCACCTTCCTTGTCTGAAGATGCGTGTGGAACGAGTCAGGGAAGTGAAATAAGGGACCAGAGTACTAGGTGCGAACTTCCTAGCAAACAGAAAGCAAACATTGATGCTGTCTCCGTTATACTTGCATTTCTTATCCCTTAA | 1947 | 0.5598 | MAAALIARVTVSIFFFSWFNVHEPRLRRPGGLQTASDASRNLATWNNSTNPCSWSGVSCIRDRVSRLVLENLDLQGSIHALTSLTHLRVLSLKGNRFSGSVPNLSNLASLKLLFLSRNQFSGEFPATVTSLFHLYRLDLSNNNFSGEIPATLTHLTHLLTLRLDGNNFSGHIPDVNLPTLQEFNVSGNGLSGEIPKALSSFPESSFGRNPFLCGAPIKKCSSDPTKPGSEGAIASPLLPQNNHPTTTVSSSPVQCQKHQHQVEGKGSKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMEVLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNVLLDKHGNARVSDFGLSVFAGPGPVGGRSNGYRAPEASDGRKQSQKSDVYSFGVLLLELLTGKCPSVVESAGSAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMACTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDTLDSVSESPSLSEDACGTSQGSEIRDQSTRCELPSKQKANIDAVSVILAFLIP | 648 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g0347 | 648 | Gene3D | Phosphorylase Kinase; domain 1 | 289 | 384 | - | - | |
Ssu7g0347 | 648 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 255 | 601 | - | - | |
Ssu7g0347 | 648 | MobiDBLite | consensus disorder prediction | 235 | 252 | - | - | |
Ssu7g0347 | 648 | SUPERFAMILY | L domain-like | 42 | 218 | - | - | |
Ssu7g0347 | 648 | Pfam | Protein kinase domain | 313 | 580 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0347 | 648 | ProSiteProfiles | Leucine-rich repeat profile. | 86 | 108 | IPR001611 | GO:0005515 | |
Ssu7g0347 | 648 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 582 | IPR011009 | - | |
Ssu7g0347 | 648 | CDD | STKc_IRAK | 315 | 585 | - | - | |
Ssu7g0347 | 648 | ProSitePatterns | Protein kinases ATP-binding region signature. | 315 | 337 | IPR017441 | GO:0005524 | |
Ssu7g0347 | 648 | Gene3D | Transferase(Phosphotransferase) domain 1 | 385 | 598 | - | - | |
Ssu7g0347 | 648 | Pfam | Leucine rich repeat N-terminal domain | 37 | 59 | IPR013210 | - | |
Ssu7g0347 | 648 | MobiDBLite | consensus disorder prediction | 224 | 252 | - | - | |
Ssu7g0347 | 648 | PANTHER | - | 255 | 601 | - | - | |
Ssu7g0347 | 648 | PANTHER | - | 31 | 225 | - | - | |
Ssu7g0347 | 648 | ProSiteProfiles | Protein kinase domain profile. | 309 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0347 | 648 | MobiDBLite | consensus disorder prediction | 598 | 620 | - | - | |
Ssu7g0347 | 648 | Gene3D | Ribonuclease Inhibitor | 32 | 82 | IPR032675 | - | |
Ssu7g0347 | 648 | Gene3D | Ribonuclease Inhibitor | 83 | 227 | IPR032675 | - | |
Ssu7g0347 | 648 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 31 | 225 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g0347 | Ssu-Chr7 | 6183829 | 6187498 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g0347 | 32 | 615 | Receptor kinase-like Gene Family | AT1G68400 | 65.991 | 0.0 | 776 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Ssu7g0347 | Pkinase | 1.7e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g0347 | - | - | gmx:100779158 | 1026.54 |