Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g0346 | ATGTACCCTAAGTTGTTCTCGAGGGCCGGTTTAAGTATAAAGCAGCCTAAGCCCTTGCTGGAGCAGAAGCTGGATTGTGAAATGATACTAGGACTCGGACTAGATCGTCAATTGGACTGTCAAACGTTGTACCATATTGCAATTGGTGTTGCTCGAGGACTAGAATACCTGCATAAAGGTTGCAATACTAGAATTTTACATTTTGACATAAAACCTCATAACATTCTCTTGGATGAGAATTTCAACCCCAAGATTTCAGATTTTGGTCTAGCAAAAATTTGcacaagaaaagaaagtatGTTATCAATATTTGGTGCTAGAGGAACTGCAGGCTATATTGCCCCAGAAGTTTTTTCCAGGAATTTTGGTGCAGTATCACATAAGTCAGATGTTTATAGTTATGGAATGATGGTCTTAGAAATGGttggaatgaaaaataatattaaggcTGAAGTAAATTGCTcgagtgaaatatatttttctcattggaTTTACAATCGTCTTGAATCAAATCAGGAGCTTGGTTTACAGAATATAAGAAGTGAAAGTGATGACAAAATAGTGAGAAAGATGACAATAGTAGGCTTATGGTGCATACAAATCCACCCTTCAACTCGACCAGCCATAAGTAAAGTGGTGGAAATGCTAGAAAGCAAAGTTGAGTTATTGCAAATTCCACCAAAACCTATTTTGTCTTCTCCTTCAACCTCTCCCGTCCATTTAACATGTGAGTCTAAGACATTGTAA | 747 | 0.3467 | MYPKLFSRAGLSIKQPKPLLEQKLDCEMILGLGLDRQLDCQTLYHIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESMLSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGMKNNIKAEVNCSSEIYFSHWIYNRLESNQELGLQNIRSESDDKIVRKMTIVGLWCIQIHPSTRPAISKVVEMLESKVELLQIPPKPILSSPSTSPVHLTCESKTL | 248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g0346 | 248 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 65 | 77 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu7g0346 | 248 | ProSiteProfiles | Protein kinase domain profile. | 1 | 223 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0346 | 248 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 34 | 243 | - | - | |
Ssu7g0346 | 248 | Pfam | Protein kinase domain | 40 | 214 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0346 | 248 | SMART | serkin_6 | 2 | 216 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu7g0346 | 248 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 34 | 243 | IPR045874 | GO:0004672 | |
Ssu7g0346 | 248 | Gene3D | Transferase(Phosphotransferase) domain 1 | 27 | 232 | - | - | |
Ssu7g0346 | 248 | SUPERFAMILY | Protein kinase-like (PK-like) | 36 | 217 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g0346 | Ssu-Chr7 | 6111561 | 6115581 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g0346 | 34 | 232 | Receptor kinase-like Gene Family | AT4G18250 | 57.073 | 2.47e-77 | 245 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Ssu7g0346 | Pkinase | 1.6e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g0346 | - | - | gmx:100786495 | 397.512 |