Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0344 ATGTTCCACGAACCCAGACTTCGACGCCCTGGTGGCCTTCAAAACCGCTTCAGACGCGTCCCGAAATCTCGCAACATGGAACAACAGCACGAACCCGTGTTCCTGGAGCGGCGTGTCGTGCATTCGAGACCGAGTCTCGCGGCTCGTTCTCGAAAACCTCGACCTCCAAGGTTCCATTCACGCCTTAACTTCCCTCACTCACCTCCGAGTTCTGAGTCTCAAAGGGAACCGTTTCTCCGGTTCTGTTCCCAACCTCTCCAACCTCACTTCCCTGAAGCTTCTCTTCCTGTCTCGCAACCAGTTCTCCGGCGAGTTCCGGCGACGGTCACGTCGCTCTTCCACCTCTACCGCCTCGATCTGTCCAACAACAACTTCTCCGGCGAGATTCCGGCGACTCTCACCCACCTGACCCACCTCCTCACTCTCCGCCTCGACGGGAACAACTTCTCCGGCCACATTCCCGACGTGAACCTGCCCACCCTGCAAGAGTTCAACGTCTCCGGCAACGGACTCTCCGGCGAGATACCCAAGGCGTTGTCAAGTTTCCCCGAATCCTCGTTCGGACGAAACCCGTTTCTCTGCGGAGCCCCAATCAAAAAATGCTCATCCGACCCGACCAAACCGGGGTCCGAAGGCGCCATTGCTTCACCACTGTTGCCACAAAACAACCACCCGACAACCACTGTATCATCTTCCCCCAGTTCAATGCCAAAAACACCAACATCAAGTGGTAAAAGCCACGAAAAGGGTGCTTCGAAGATAAGTCCGGTGGCACTCATAGCTATTATAGTGGGTGATGTGTTGGTTCTCGCCGTGGTGtctttgcttttgttttgcTACTTCTGGAGGAACTACTCTGCGAAGTTGAAGGAGGGGAAGGGGTCGAAGCTGTTTGAGAGTGAGAAGATTGTTTATTCGTCGAGTCCGTACCCTGCTCAGGGAGGGTTCGAGAGGGGTCGAATGGTGTTCTTCGAGGGGGAGAAAAGGTTTGAGCTTGAGGACCTGTTGCGAGCCTCTGCGGAAATGCTCGGAAAGGGTGGGTTCGGGACCGCGTACAAAGCGGTGCTTGATGATGGCAATGTGGTTGCGGTGAAGAGACTCAAGGACGCGCAGATAACGGGGAAGAGAGAGTTCGAGCAGCACATGGAGGTGTTGGGAAGGTTGAGACATCCCAACGTTGTTAGCTTGAGGGCTTACTATTTCGCGCGCGAGGAGAAGTTGTTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGGGGACCCGGACGAACCCCACTGGACTGGACCACGCGGCTCAAGATAGCAGCGGGAGCGGCACGAGGCGTGGCTTTCATTCATAACTCGTGCAAGTCCCTTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCATGGAAACGCGCGGGTCTCGGATTTTGGGCTCTCGGTCTTCGCGGGCCGGGCCCAGTGGGCGGGAGATCCAACGGCTACCGCGCGCCGGAGGCATCGGACGGCCGAAAACAGTCCCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTGCTGGAGCTGCTCACGGGGAAGTGCCCCTCCGTGGTCGAGAGTGCAGGGAGTGCCTACGGTGGGGTCGTGGACCTACCGAGGTGGGTCCAGTCAGTGGTGA 1677 0.5635 MFHEPRLRRPGGLQNRFRRVPKSRNMEQQHEPVFLERRVVHSRPSLAARSRKPRPPRFHSRLNFPHSPPSSESQREPFLRFCSQPLQPHFPEASLPVSQPVLRRVPATVTSLFHLYRLDLSNNNFSGEIPATLTHLTHLLTLRLDGNNFSGHIPDVNLPTLQEFNVSGNGLSGEIPKALSSFPESSFGRNPFLCGAPIKKCSSDPTKPGSEGAIASPLLPQNNHPTTTVSSSPSSMPKTPTSSGKSHEKGASKISPVALIAIIVGDVLVLAVVSLLLFCYFWRNYSAKLKEGKGSKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMEVLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNVLLDKHGNARVSDFGLSVFAGRAQWAGDPTATARRRHRTAENSPRSLTCTLSVCSCWSCSRGSAPPWSRVQGVPTVGSWTYRGGSSQW 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0344 558 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Ssu7g0344 558 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
Ssu7g0344 558 MobiDBLite consensus disorder prediction 203 249 - -
Ssu7g0344 558 Pfam Protein kinase domain 341 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0344 558 MobiDBLite consensus disorder prediction 44 59 - -
Ssu7g0344 558 SUPERFAMILY Protein kinase-like (PK-like) 341 494 IPR011009 -
Ssu7g0344 558 Gene3D Transferase(Phosphotransferase) domain 1 413 527 - -
Ssu7g0344 558 PANTHER - 111 493 - -
Ssu7g0344 558 MobiDBLite consensus disorder prediction 216 249 - -
Ssu7g0344 558 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 111 493 - -
Ssu7g0344 558 ProSiteProfiles Protein kinase domain profile. 337 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0344 558 MobiDBLite consensus disorder prediction 44 76 - -
Ssu7g0344 558 SUPERFAMILY L domain-like 102 195 - -
Ssu7g0344 558 Gene3D Ribonuclease Inhibitor 96 208 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0344 Ssu-Chr7 5931640 5934120 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0344 106 490 Receptor kinase-like Gene Family AT1G68400 66.750 1.21e-170 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ssu7g0344 Pkinase 7.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0344 - - gmx:100779158 661.759