Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0300 ATGGGTCTTCAAATCAAGAAACCACTCCTTTTCACTCTCATTACAATAGCTCTTATTTCAATCACAAAACTCTTGCACTCTTATTTTTCTGTACCTTTCTCCCCATCCAATCTTTCTATTGCTGGTGCCACCATCATTTCTGCTCTAATCATATACTTATTTTCCTCAGCCTCTTCAAACAAACACTCTTCCACTCTTCCCCCAGGTCCTTTATCTGTTCCTATATTTGGCAACTGGTTACAAGTTGGCAATGACCTCAACCACCGTCTTCTTGCATCAATGTCACAAACCTATGGTCCCGTTTTCTTACTCAAACTCGGTTCCAAAAACTTGGTTGTGGTCTCTGATCCCGAGCTTGCCACGCAAGTCCTCCACTCGCAAGGCGTGGAATTTGGCTCTCGCCCACGAAACGTTGTGTTTGATATCTTCACCGGGAATGGGCAAGACATGGTTTTCACTGTTTACGGTGACCACTGGCGCAAAATGCGCAGAATAATGACGCTGCCATTTTTCACCAACAAGGTTGTCCACAACTACAGCAACATGTGGGAGGAAGAGATGGACTTGGTGGTGCGCGACCTCAATGCCAATGAGAAAGTGGGAAGTGAAGGGATAGTTATCAGAAAGCGGCTTCAGTTGATGCTGTACAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTCAGGCCACAAGGTTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTTGAATACAATTACGGAGATTTTATACCATTGCTCCGGCCATTCTTGCGGGGATACCTCAACAAGTGCAAGGACTTGCAATCTAGGAGGTTGGCATTTTTCAACACCCACTACGTTGAAAAAAGAAGACAAATAATGGCTGCCAATGGGAAGAAACACAAGATCAGTTGTGCAATTGATCACATCATAGATGCTCAGATGAAGGGAGAAATCAGTGAAGAGAATGTGATCTACATAGTAGAAAACATCAATGTTGCAGCAATTGAAACGACACTATGGTCCATGGAATGGGCAATAGCAGAGTTGGTCAATCATCCAACGGTTCAGAGCAAGATTCGTGATGAGATATCGAGAGTGCTTAAAGGGGAGCCAGTTACAGAATCCAACCTACACGAGCTACCATACTTACAAGCCACGGTGAAAGAGACACTAAGACTTCACACCCCAATTCCTCTTTTGGTGCCCCACATGAACCTGGAGGAAGCAAAGCTAGGAGGGTACTCTATTCCAAAAGAGTCCAAGGTGGTAGTGAATGCTTGGTGGCTTGCCAACAACCCATCATGGTGGAAGAACCCGGAGGAGTTCAGGCCGGAGAGGTTCTTGCAAGAGGAATGTGCAACAGATGCAGTTGCAGGAGGAAAGGTTGACTTTAGGTTCGTGCCATTTGGTGTGGGGAGGAGGAGTTGCCCCGGGATCATACTTGCATTGCCAATACTGGGACTGGTGATTGCAAAGTTGGTGTCAAACTTTCAGCTGAGTGCTCCAGCGGGGACAAAGATAGATGTGAGTGAAAAAGGAGGGCAATTCAGCTTGCACATTGCCAACCACTCCACTGTGTTGTTCCATTCAATTAGGGCACAGTGA 1620 0.4568 MGLQIKKPLLFTLITIALISITKLLHSYFSVPFSPSNLSIAGATIISALIIYLFSSASSNKHSSTLPPGPLSVPIFGNWLQVGNDLNHRLLASMSQTYGPVFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLVVRDLNANEKVGSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNTHYVEKRRQIMAANGKKHKISCAIDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQSKIRDEISRVLKGEPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYSIPKESKVVVNAWWLANNPSWWKNPEEFRPERFLQEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVSNFQLSAPAGTKIDVSEKGGQFSLHIANHSTVLFHSIRAQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0300 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Ssu7g0300 539 Gene3D Cytochrome P450 56 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 6 537 - -
Ssu7g0300 539 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 119 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 Pfam Cytochrome P450 67 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0300 539 PANTHER OS02G0467000 PROTEIN 6 537 - -
Ssu7g0300 539 SUPERFAMILY Cytochrome P450 67 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0300 Ssu-Chr7 4933957 4936035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0300 76 532 Monolignol Biosynthesis Gene Families AT2G30490 65.652 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0300 K00487 - gmx:100812188 1016.91