Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0289 ATGGCGCTTGTGGGAGGTGCAGGTTCCGTTGGTGTTCATGGGTGGGGAGAGATGAAGAGTCTCACCACCCAAGTCATCACCGGTCGATGGTTCGTGGTGTTTGCCTCCTTTCTAATCATGGCAGCCGCTGGAGCCACCTACATGTTCGGCCTCTATTCCGGTGAAATCAAAACCACCCTTGGTTATGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTTGGTAGCAACGTTGGCGTCCTCTCAGGGCTAATCAACGAGCTCACTCCACCCTGGGTGGTCCTAGCCATCGGTGCCATCCTAAACTTTTTCGGCTATTTCATGATATGGCTATCAGTGACCAAAAGAATAGCCAAACCCCAAGTGTGGCAGATGTGTCTATACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCCAACACCGGTTCCCTTGTCACTTGTGTCAAGAACTTTCCAGAAAGCCGTGGGGCTGTGTTGGGCATCCTCAAAGGCTATGTGGGTCTTAGTGGTGCAATCATCACACAACTATACTCCGCTATTTACTACGATGACGCTAAGGCTTTGATTTTGTTCATAGGTTGGCTCCCAGCTGCTATTTCCTTTGCTTTCCTTCGAACCATTCGATACATGAAGCCTGTTAGGCGGCCTAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCCCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCATTGTGGAGAAAAAGGTCAACTTCACCCAGAGTGAGTATGGTGTGAGCGCTGCTATGGTGCTCTTCTTGCTCTTCCTCCCACTTGCTATTGTTTCTATCGAAGAATATAAGATCTGGCAGAGTAAAAGGCTTGCATTGGTTGATCCGTCGCCGGTTAAAATAGTAACCGAGGTTGAAAAGGTCAACCCGAATGAGGCTACTAATGGTAATAACAATTCAGTTTCAGTTTCAGCAGTTTCCAACGACACCAAGTGGTGGCAAAATGTGCTTAGTCCACCAGAAAGAGGTGAGGACTACACAATACTTCAAGCGCTATTCAGCGTTGACATGTTAATACTATTCATAACTTGCATCTGTGGTGTTGGGGGCACGTTGACCGCAATAGATAATCTGGGTCAGATAGGAACCTCGCTTAGATACCCCAAGAAAAGCACAAGCACTTTCGTGTCCCTAGTAAGCATTTGGAATTATCTAGGACGGGTTTTCTCTGGATTTGTTTCTgaacattttctaaaaaagtacAAGTTTCCTCGTCCTCTTATGCTTACTTTAACTCTACTCTTATCATGCGTTGGTCACCTTCTGATAGCATTTGACGTGCCAAATGGTCTTTATGCGGCTTCGGTAATTATTGGTTTTTGTTTTGGCGCACAGTGGCCTTTACTTTTTGCCATCATATCCGAGCTTTTTGGACTCAAATATTATGCAACTTTGTACAACTTTGGAAGCGTAGCAAGTCCGCTAGGGCTATATGTGCTTAATGTAAGGATGACTGGGCATTTGTATGACAAAGAAGCCAAGAAGCAACTGGCAGCATTGGGGCTTGAAAGAAGGGAAGGGCAGGAATTGAATTGTATTGGAGTCAATTGCTTCAAGTTATCCTTTATTATTATCACAGCTGCAACTTTCTTCGGTGCCATTGTTTCACTCATTTTGGTGTCTAGGACAAGAATGTTTTACAAAGGTGACATATACAAGAGATTCCGGGATGCGGCCACGGTGGCAGAAGCTGAAATGGGGGTTGTGGAGAACGGAAGCAAGGCAGAGAAAGATGCCAAACATGTGGTGCCAACTCAGAAGTAG 1809 0.4511 MALVGGAGSVGVHGWGEMKSLTTQVITGRWFVVFASFLIMAAAGATYMFGLYSGEIKTTLGYDQTTLNLLSFFKDFGSNVGVLSGLINELTPPWVVLAIGAILNFFGYFMIWLSVTKRIAKPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDAKALILFIGWLPAAISFAFLRTIRYMKPVRRPNELKVFYNFLYISLGLAGFLLVMIIVEKKVNFTQSEYGVSAAMVLFLLFLPLAIVSIEEYKIWQSKRLALVDPSPVKIVTEVEKVNPNEATNGNNNSVSVSAVSNDTKWWQNVLSPPERGEDYTILQALFSVDMLILFITCICGVGGTLTAIDNLGQIGTSLRYPKKSTSTFVSLVSIWNYLGRVFSGFVSEHFLKKYKFPRPLMLTLTLLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVRMTGHLYDKEAKKQLAALGLERREGQELNCIGVNCFKLSFIIITAATFFGAIVSLILVSRTRMFYKGDIYKRFRDAATVAEAEMGVVENGSKAEKDAKHVVPTQK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0289 602 CDD MFS_Mch1p_like 28 548 - -
Ssu7g0289 602 PANTHER MFS TRANSPORTER 12 602 - -
Ssu7g0289 602 SUPERFAMILY MFS general substrate transporter 28 559 IPR036259 -
Ssu7g0289 602 Pfam Nodulin-like 29 273 IPR010658 -
Ssu7g0289 602 Gene3D MFS general substrate transporter like domains 346 561 IPR036259 -
Ssu7g0289 602 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0289 Ssu-Chr7 4745716 4747524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0289 16 572 Nodulin-like Gene Family AT2G39210 73.118 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0289 - - pvu:PHAVU_007G024800g 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0289 7 4745716 4747524 Ssu7g0289 7 4745716 4747524 ECH