Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0288 ATGGCGTTCGGGGGAGGTGCAGGTTCCGTGGGTGTTCATGGGTGGGGAGACATGAAGAGTCTCACCATCCAAGTCATCACCGGTCGGTGGTTCGTGGTGTTTGCCTCCTTTCTAATAATGGCAGCCGCCGGAGCCACCTACATGTTCGGCCTCTACTCCGGCGACATAAAATCCACACTTGGTTATGACCAAACCACTCTGAATCTCCTCAGTTTCTTCAAGGACATGGGCACCAACGTTGGCGTCCTCTCAGGGCTAATCAACGAGCTCACTCCACCCTGGGTGGTCCTAGCCATCGGTGCCATCCTAAACTTTTTCGGCTACTTCATGATATGA 336 0.5357 MAFGGGAGSVGVHGWGDMKSLTIQVITGRWFVVFASFLIMAAAGATYMFGLYSGDIKSTLGYDQTTLNLLSFFKDMGTNVGVLSGLINELTPPWVVLAIGAILNFFGYFMI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0288 111 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 111 - -
Ssu7g0288 111 Pfam Nodulin-like 29 111 IPR010658 -
Ssu7g0288 111 PANTHER MFS TRANSPORTER 11 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0288 Ssu-Chr7 4721146 4721481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0288 16 111 Nodulin-like Gene Family AT2G39210 80.208 7.17e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0288 - - pvu:PHAVU_007G024800g 204.527