Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0287 ATGTGTCTCTACATCTTCATAGGTGCTAACTCTCAGGCCTTCGCCAACACCGGTTCCCTCGTCACTTGTGTCAAGAACTTTCCAGAAAGTCGTGGGGTTGTGCTAGGCATCCTCAAAGGCTATCTTGGCCTTAGTGGTGCAATCATCACACAACTATACTCTGCTATCTACTATGATGACACTAAGGCTTTGATTTTGCTCATAGGTTGGCTCCCAGCTGCTATTTCCTTTGCTTCCCTTCGAACCGTTCGACTCATGAAGCCTGTTAGGCAGCCTAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCGCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCATTGTAGAGAAAGAGGTCCACTTCACCCGGAGTGAGTATGGTGTGAGCGCTGCTACAGTGCTCTTCTTGCTCTTCCTCCCACTTGCTGTTGTTTCTATCGAAGAATATAAGATCTGGCAGAGTAAAAGGCTTGCATTGGTTGATCCCTCCCCGGTGAAAATAGTAACCGAGGGTGAAAAAGTCAACCTGAATGAGGTTACTAATAATGGTAACAATTCAGTTTCAGCAGTTTCTAACGATACCAAGTGGTGGGAAAATGTGTTTAGTCCACCAGAAAGAGGTGAGGACTACACAATTCTTCAAGCGCTATTCAGCATCGACATGTTAATACTATTCATATGTAGCATCTGTGGTATTGGGGGCACGTTGACCGCAATAGATAATCTGGGTCAGATTGGAAAGTCGCTTAGATACCCCAAGAAAAGCATAAGCACTTTCGTGTCCCTAGTAAGCATTTGGAATTACCTAGGACGGGTTTTCTCTGGATTTGTTTCTGAACATTTTTTACACAAGTACAAGTTTCCTCGTCCTCTTATGCTTACTTTAACTATGCTCTTATCATGTGTCGGGCACCTTCTGATAGCATTTGATGTGCCAAATGGTCTTTATGCGGCTTCGGTAATTATTGGGTTTTGTTTTGGCGCACAGTGGCCTTTACTTTTTGCCATTATTTCCGAGCTTTTTGGACTTAAATATTATGCAACTTTGTACAATTTTGGAAGCGTAGCAAGTCCACTAGGGCTATATGTGCTTAATGTCTTGATGACTGGGCATGTGTATGACAAAGAAGCCAAGAAGCAGCTGACAGCACTGGGgcttgaaagaaagaaagggcaGGAATTGAATTGTATTGGGGTCAATTGCTACAAGTTATCCTTCGTTGTTATCACTGCTGCAACTTTCTTCGGTGTCATTGTTTCGGTCATTTTGGTGGCTAGGACAAGAACGTTTTACAAAGGTGACATATACAAGAGATTCCGGGATGAGGCAACGGTGGCAGAAGCTGAAATGGCGGGGGTGGAAAACGGGAGCAAGGCAGAGAAAGATGCCAAACATGTGCCAACCCAGGACTAA 1422 0.4332 MCLYIFIGANSQAFANTGSLVTCVKNFPESRGVVLGILKGYLGLSGAIITQLYSAIYYDDTKALILLIGWLPAAISFASLRTVRLMKPVRQPNELKVFYNFLYISLGLAGFLLVMIIVEKEVHFTRSEYGVSAATVLFLLFLPLAVVSIEEYKIWQSKRLALVDPSPVKIVTEGEKVNLNEVTNNGNNSVSAVSNDTKWWENVFSPPERGEDYTILQALFSIDMLILFICSICGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLHKYKFPRPLMLTLTMLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVLMTGHVYDKEAKKQLTALGLERKKGQELNCIGVNCYKLSFVVITAATFFGVIVSVILVARTRTFYKGDIYKRFRDEATVAEAEMAGVENGSKAEKDAKHVPTQD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0287 473 Pfam Major Facilitator Superfamily 226 422 IPR011701 GO:0022857|GO:0055085
Ssu7g0287 473 PANTHER MFS TRANSPORTER 1 471 - -
Ssu7g0287 473 SUPERFAMILY MFS general substrate transporter 5 431 IPR036259 -
Ssu7g0287 473 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 471 - -
Ssu7g0287 473 Gene3D MFS general substrate transporter like domains 217 434 IPR036259 -
Ssu7g0287 473 Pfam Nodulin-like 1 147 IPR010658 -
Ssu7g0287 473 MobiDBLite consensus disorder prediction 454 473 - -
Ssu7g0287 473 MobiDBLite consensus disorder prediction 457 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0287 Ssu-Chr7 4719682 4721103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0287 1 445 Nodulin-like Gene Family AT2G39210 69.866 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0287 - - pvu:PHAVU_007G024800g 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0287 7 4719682 4721103 Ssu7g0287 7 4719682 4721103 ECH